RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CAVIN2O95810 425 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 ZBED1O96006 694 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 CORO1AP31146 461 aaKnown RBP17.04■□□□□ 0.32
SCLT1-204ENST00000503215 P2RY2P41231 377 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 ADIGQ0VDE8 80 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 STIM1Q13586 685 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 MAP7D1Q3KQU3 841 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 PKDCCQ504Y2 493 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 TMEM270Q6UE05 265 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 RRAGAQ7L523 313 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 DENND1CQ8IV53 801 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 ARHGEF19Q8IW93 802 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 EDEM1Q92611 657 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 GTPBP4Q9BZE4 634 aaKnown RBP17.04■□□□□ 0.32
SCLT1-204ENST00000503215 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
SCLT1-204ENST00000503215 CD248Q9HCU0 757 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 POLMQ9NP87 494 aaPredicted RBP17.04■□□□□ 0.32
SCLT1-204ENST00000503215 VPS45Q9NRW7 570 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 BCCIPQ9P287 314 aaKnown RBP eCLIP17.04■□□□□ 0.32
SCLT1-204ENST00000503215 AGO1Q9UL18 857 aaKnown RBP17.04■□□□□ 0.32
SCLT1-204ENST00000503215 STARD13Q9Y3M8 1113 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 PCDHB4Q9Y5E5 795 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 RAD54BQ9Y620 910 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 THADAQ6YHU6 1953 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 YJEFN3A6XGL0 299 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 WASH3PC4AMC7 463 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 E7ENQ6 273 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 ALDH1A2O94788 518 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 VDRP11473 427 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 GABRG2P18507 467 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 RGS7P49802 495 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 BCAT1P54687 386 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 COG7P83436 770 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 BST2Q10589 180 aaKnown RBP17.03■□□□□ 0.32
SCLT1-204ENST00000503215 PPM1JQ5JR12 505 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 STPG1Q5TH74 334 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 FYB2Q5VWT5 728 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 RSRC2Q7L4I2 434 aaKnown RBP17.03■□□□□ 0.32
SCLT1-204ENST00000503215 TADA2BQ86TJ2 420 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 TMEFF1Q8IYR6 380 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 PGBD3Q8N328 593 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 PPM1KQ8N3J5 372 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 KCNV2Q8TDN2 545 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 NT5C1BQ96P26 610 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 XPO6Q96QU8 1125 aaKnown RBP17.03■□□□□ 0.32
SCLT1-204ENST00000503215 SLC6A17Q9H1V8 727 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 SFMBT1Q9UHJ3 866 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 FBXO10Q9UK96 956 aa17.03■□□□□ 0.32
SCLT1-204ENST00000503215 PMM2O15305 246 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 PENKP01210 267 aaPredicted RBP17.02■□□□□ 0.32
SCLT1-204ENST00000503215 TPRP12270 2363 aaKnown RBP17.02■□□□□ 0.32
SCLT1-204ENST00000503215 HOXB2P14652 356 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 TBXAS1P24557 533 aaPredicted RBP17.02■□□□□ 0.32
SCLT1-204ENST00000503215 BRD2P25440 801 aaKnown RBP17.02■□□□□ 0.32
SCLT1-204ENST00000503215 NTSR1P30989 418 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 PTGER3P43115 390 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 DHPSP49366 369 aaPredicted RBP17.02■□□□□ 0.32
SCLT1-204ENST00000503215 DGKGP49619 791 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 YWHAEP62258 255 aaKnown RBP17.02■□□□□ 0.32
SCLT1-204ENST00000503215 BSPRYQ5W0U4 402 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 LCLAT1Q6UWP7 414 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 ARMCX6Q7L4S7 300 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 ARHGAP18Q8N392 663 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 DEFB119Q8N690 84 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 KREMEN1Q96MU8 473 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 SRRTQ9BXP5 876 aaKnown RBP17.02■□□□□ 0.32
SCLT1-204ENST00000503215 LRRC4Q9HBW1 653 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 CACNA2D2Q9NY47 1150 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 HESX1Q9UBX0 185 aa17.02■□□□□ 0.32
SCLT1-204ENST00000503215 LCP1P13796 627 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 LIMK1P53667 647 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 SLC8A3P57103 927 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 KCNH2Q12809 1159 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 GEN1Q17RS7 908 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 PMF1Q6P1K2 205 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 FMNL3Q8IVF7 1028 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 TRIM59Q8IWR1 403 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 CHPFQ8IZ52 775 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 EHBP1Q8NDI1 1231 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 IPO4Q8TEX9 1081 aaKnown RBP17.02■□□□□ 0.31
SCLT1-204ENST00000503215 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 PIGKQ92643 395 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 MED15Q96RN5 788 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 CDK5RAP1Q96SZ6 601 aaKnown RBP17.02■□□□□ 0.31
SCLT1-204ENST00000503215 CD93Q9NPY3 652 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 CALCOCO1Q9P1Z2 691 aa17.02■□□□□ 0.31
SCLT1-204ENST00000503215 NUP205Q92621 2012 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 MAP3K13O43283 966 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 MSI1O43347 362 aaKnown RBP17.01■□□□□ 0.31
SCLT1-204ENST00000503215 FOXD2O60548 495 aaPredicted RBP17.01■□□□□ 0.31
SCLT1-204ENST00000503215 PAEPP09466 180 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 MFAP3P55082 362 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 IRX4P78413 519 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 PAK1Q13153 545 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 TRIP4Q15650 581 aaPredicted RBP17.01■□□□□ 0.31
SCLT1-204ENST00000503215 CAMK4Q16566 473 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 PREPLQ4J6C6 727 aaPredicted RBP17.01■□□□□ 0.31
SCLT1-204ENST00000503215 CYP2U1Q7Z449 544 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 RBBP8NLQ8NC74 664 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms