RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 MON1BQ7L1V2 547 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 ARCQ7LC44 396 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 VPS36Q86VN1 386 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 ADGRG2Q8IZP9 1017 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 DEFB106AQ8N104 65 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 ATP2A3Q93084 1043 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 VCPIP1Q96JH7 1222 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 SERPINB11Q96P15 392 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 LINC00597Q9H2U6 94 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 EBF3Q9H4W6 596 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 ARHGEF3Q9NR81 526 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 HEBP1Q9NRV9 189 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 GTSE1Q9NYZ3 720 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 CA14Q9ULX7 337 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 AKR1B15C9JRZ8 316 aaPredicted RBP16.23■□□□□ 0.19
CPNE1-228ENST00000498814 GRAP2O75791 330 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 NFATC1O95644 943 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 IGLV3-25P01717 112 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 IGLV3-27P01718 113 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 HMBSP08397 361 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 ARSAP15289 507 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 NOS2P35228 1153 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 ADKP55263 362 aaKnown RBP16.23■□□□□ 0.19
CPNE1-228ENST00000498814 CDK17Q00537 523 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 RING1Q06587 406 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 NNTQ13423 1086 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 MLF2Q15773 248 aaPredicted RBP16.23■□□□□ 0.19
CPNE1-228ENST00000498814 TSR1Q2NL82 804 aaKnown RBP16.23■□□□□ 0.19
CPNE1-228ENST00000498814 WDR59Q6PJI9 974 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 CNGA4Q8IV77 575 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 BBS7Q8IWZ6 715 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 MCOLN2Q8IZK6 566 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 SIX5Q8N196 739 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 CPA6Q8N4T0 437 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 SHDQ96IW2 340 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 C8orf33Q9H7E9 229 aaPredicted RBP16.23■□□□□ 0.19
CPNE1-228ENST00000498814 ABHD10Q9NUJ1 306 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 ZNHIT6Q9NWK9 470 aaKnown RBP16.23■□□□□ 0.19
CPNE1-228ENST00000498814 TAS2R14Q9NYV8 317 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 ARHGAP20Q9P2F6 1191 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 TMEM59LQ9UK28 342 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 TLR6Q9Y2C9 796 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 ZNF510Q9Y2H8 683 aa16.23■□□□□ 0.19
CPNE1-228ENST00000498814 OTOL1A6NHN0 477 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-228ENST00000498814 GOLGA8SH3BPF8 625 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 SCAMP3O14828 347 aaKnown RBP16.22■□□□□ 0.19
CPNE1-228ENST00000498814 MSI1O43347 362 aaKnown RBP16.22■□□□□ 0.19
CPNE1-228ENST00000498814 RTN2O75298 545 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 TRUB2O95900 331 aaKnown RBP16.22■□□□□ 0.19
CPNE1-228ENST00000498814 KLKB1P03952 638 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 PLEKP08567 350 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-228ENST00000498814 MATKP42679 507 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 TBX4P57082 545 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 STARD6P59095 220 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 NR1H3Q13133 447 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 EIF4EBP2Q13542 120 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-228ENST00000498814 BMP8AQ7Z5Y6 402 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 TAC4Q86UU9 113 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 MSANTD3Q96H12 275 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 DDX23Q9BUQ8 820 aaKnown RBP16.22■□□□□ 0.19
CPNE1-228ENST00000498814 C1QTNF1Q9BXJ1 281 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 ECT2Q9H8V3 914 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 RRN3Q9NYV6 651 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.22■□□□□ 0.19
CPNE1-228ENST00000498814 ADAMTS1Q9UHI8 967 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 PIAS3Q9Y6X2 628 aa16.22■□□□□ 0.19
CPNE1-228ENST00000498814 COL4A3Q01955 1670 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 MAN2B1O00754 1011 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 GPR37L1O60883 481 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 CORO1AP31146 461 aaKnown RBP16.21■□□□□ 0.19
CPNE1-228ENST00000498814 HARS2P49590 506 aaKnown RBP16.21■□□□□ 0.19
CPNE1-228ENST00000498814 RNASE9P60153 205 aaKnown RBP16.21■□□□□ 0.19
CPNE1-228ENST00000498814 NUGGCQ68CJ6 796 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 C1orf228Q6PIY5 440 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 TPRG1Q6ZUI0 275 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 RALGPS2Q86X27 583 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-228ENST00000498814 UNC45BQ8IWX7 931 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 C3orf20Q8ND61 904 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 ADAM32Q8TC27 787 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 NT5C3BQ969T7 300 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 SLC39A13Q96H72 371 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 NPY6RQ99463 290 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.21■□□□□ 0.19
CPNE1-228ENST00000498814 ISCUQ9H1K1 167 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 C11orf16Q9NQ32 467 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
CPNE1-228ENST00000498814 AGO1Q9UL18 857 aaKnown RBP16.21■□□□□ 0.19
CPNE1-228ENST00000498814 MIA3Q5JRA6 1907 aa16.21■□□□□ 0.19
CPNE1-228ENST00000498814 A0A087X0T9 212 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 SSU72P8A0A1W2PR75 194 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 TCRBV5S1A1TA0A578 114 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 SHISA7A6NL88 538 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 TMCO5BA8MYB1 307 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 SPECC1L-ADORA2AF8WAN1 911 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 IRAK2O43187 625 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 ADCY5O95622 1261 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 LATS1O95835 1130 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 FTLP02792 175 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-228ENST00000498814 CYP17A1P05093 508 aa16.2■□□□□ 0.18
CPNE1-228ENST00000498814 FAM228BP0C875 321 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms