RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 TLR8Q9NR97 1041 aaKnown RBP13.36□□□□□ -0.27
TRIM27-207ENST00000498117 STK17AQ9UEE5 414 aa13.36□□□□□ -0.27
TRIM27-207ENST00000498117 SLC27A6Q9Y2P4 619 aa13.36□□□□□ -0.27
TRIM27-207ENST00000498117 TENM4Q6N022 2769 aa13.36□□□□□ -0.27
TRIM27-207ENST00000498117 CYSRT1A8MQ03 144 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 KCNK3O14649 394 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 TBX18O95935 607 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 C1SP09871 688 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 CASP5P51878 434 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 GRIN1Q05586 938 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 FAM124AQ86V42 546 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 SMARCD1Q96GM5 515 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 NRSN2Q9GZP1 204 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 PLK2Q9NYY3 685 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 CCDC39Q9UFE4 941 aa13.35□□□□□ -0.27
TRIM27-207ENST00000498117 H0Y8X5 98 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 H3BQV1 296 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 PAPSS1O43252 624 aaPredicted RBP13.34□□□□□ -0.27
TRIM27-207ENST00000498117 IDEP14735 1019 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 TNNI1P19237 187 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 PLA2G4AP47712 749 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 COPAP53621 1224 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 MFAP3P55082 362 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 RTP5Q14D33 572 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 PAQR9Q6ZVX9 377 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 SV2BQ7L1I2 683 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 FAM35AQ86V20 835 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 CBWD2Q8IUF1 395 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 SNIP1Q8TAD8 396 aaKnown RBP13.34□□□□□ -0.27
TRIM27-207ENST00000498117 FGF11Q92914 225 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 DNAJC19Q96DA6 116 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 TNIP3Q96KP6 325 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 C6orf106Q9H6K1 298 aaPredicted RBP13.34□□□□□ -0.27
TRIM27-207ENST00000498117 KIAA1586Q9HCI6 787 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 TM9SF3Q9HD45 589 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 CYLDQ9NQC7 956 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.34□□□□□ -0.27
TRIM27-207ENST00000498117 SLCO1B1Q9Y6L6 691 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 SPTA1P02549 2419 aa13.34□□□□□ -0.27
TRIM27-207ENST00000498117 ENC1O14682 589 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 TIMM44O43615 452 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 AP1G2O75843 785 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 DLATP10515 647 aaKnown RBP13.33□□□□□ -0.28
TRIM27-207ENST00000498117 CTSKP43235 329 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 PGFP49763 221 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 TARDBPQ13148 414 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRIM27-207ENST00000498117 TRPC3Q13507 836 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 ZNF234Q14588 700 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 GEN1Q17RS7 908 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 RRAGBQ5VZM2 374 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 KLHDC10Q6PID8 442 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 Q6ZNB5 142 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 ADAT2Q7Z6V5 191 aaKnown RBP13.33□□□□□ -0.28
TRIM27-207ENST00000498117 ELOVL2Q9NXB9 296 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
TRIM27-207ENST00000498117 ZNF510Q9Y2H8 683 aa13.33□□□□□ -0.28
TRIM27-207ENST00000498117 COL6A6A6NMZ7 2263 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 ERVH48-1M5A8F1 160 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 RFPL3O75679 317 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 LDOC1O95751 146 aaPredicted RBP13.32□□□□□ -0.28
TRIM27-207ENST00000498117 STAU1O95793 577 aaKnown RBP13.32□□□□□ -0.28
TRIM27-207ENST00000498117 PENKP01210 267 aaPredicted RBP13.32□□□□□ -0.28
TRIM27-207ENST00000498117 EPHX1P07099 455 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 CD27P26842 260 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 ATICP31939 592 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 ACSL1P33121 698 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 CHKAP35790 457 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 EIF4HQ15056 248 aaKnown RBP13.32□□□□□ -0.28
TRIM27-207ENST00000498117 TAF1BQ53T94 588 aaPredicted RBP13.32□□□□□ -0.28
TRIM27-207ENST00000498117 SERPINA13PQ6UXR4 307 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 STXBP4Q6ZWJ1 553 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 ANKS1BQ7Z6G8 1248 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 CACUL1Q86Y37 369 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 OR2T3Q8NH03 318 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
TRIM27-207ENST00000498117 WBP1Q96G27 269 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 TMEM176AQ96HP8 235 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 EPSTI1Q96J88 318 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 BTBD1Q9H0C5 482 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 LHX5Q9H2C1 402 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 KRT82Q9NSB4 513 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 HSPBP1Q9NZL4 362 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 DNMT3LQ9UJW3 386 aa13.32□□□□□ -0.28
TRIM27-207ENST00000498117 MYO18BQ8IUG5 2567 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 A0A1B0GTQ1 180 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 FRMD3A2A2Y4 597 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 TSPAN3O60637 253 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 SEMA4FO95754 770 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 PRKCHP24723 683 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 ACTN2P35609 894 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 C21orf59P57076 290 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 MYL6P60660 151 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 CXADRP78310 365 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 IL9RQ01113 521 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 ARID5AQ03989 594 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 KCNT1Q5JUK3 1230 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 FYB2Q5VWT5 728 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 PCSK4Q6UW60 755 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 LAYNQ6UX15 382 aa13.31□□□□□ -0.28
TRIM27-207ENST00000498117 TADA2BQ86TJ2 420 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms