RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SLC12A8A0AV02 714 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 M0QYT0 321 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 DPYSL4O14531 572 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 IRAK2O43187 625 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 BUB1O43683 1085 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 KRT86O43790 486 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 OLFM2O95897 454 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 TRUB2O95900 331 aaKnown RBP14.15□□□□□ -0.14
CPNE1-227ENST00000498056 HDCP19113 662 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 ZNF252P-AS1Q0IIN9 211 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 BEND5Q7L4P6 421 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 CMTM8Q8IZV2 173 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 FAM172AQ8WUF8 416 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 ZSWIM3Q96MP5 696 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 MYADMQ96S97 322 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 CYP2S1Q96SQ9 504 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 DDX23Q9BUQ8 820 aaKnown RBP14.15□□□□□ -0.14
CPNE1-227ENST00000498056 SLC46A2Q9BY10 475 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 RNF38Q9H0F5 515 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 RRN3Q9NYV6 651 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 ZMYM5Q9UJ78 669 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 USTQ9Y2C2 406 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 KIAA1549LQ6ZVL6 1849 aa14.15□□□□□ -0.14
CPNE1-227ENST00000498056 TMEM191CA6NGB0 347 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 PJA2O43164 708 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 PFKLP17858 780 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 RDXP35241 583 aaKnown RBP14.14□□□□□ -0.15
CPNE1-227ENST00000498056 PTPN9P43378 593 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 ZNF143P52747 638 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-227ENST00000498056 DEUP1Q05D60 604 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 MESDQ14696 234 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 SLC25A52Q3SY17 297 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 CCDC14Q49A88 953 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 KLHDC10Q6PID8 442 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 ARCQ7LC44 396 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-227ENST00000498056 RNF34Q969K3 372 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 NPY6RQ99463 290 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 CNPY3Q9BT09 278 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 TRMT1Q9NXH9 659 aaKnown RBP14.14□□□□□ -0.15
CPNE1-227ENST00000498056 IP6K2Q9UHH9 426 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 GUCA1BQ9UMX6 200 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 FAM50BQ9Y247 325 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 DUSP10Q9Y6W6 482 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 MYO10Q9HD67 2058 aa14.14□□□□□ -0.15
CPNE1-227ENST00000498056 COL4A2P08572 1712 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 MYO1FO00160 1098 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 SCAMP3O14828 347 aaKnown RBP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 ZSCAN12O43309 604 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 MTA2O94776 668 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 MOCS3O95396 460 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 MOCS2O96007 188 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 APOEP02649 317 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 IL9P15248 144 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 GBP1P32455 592 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 GJC1P36383 396 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 SSR1P43307 286 aaKnown RBP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 ATXN1P54253 815 aaKnown RBP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 TBX4P57082 545 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 SLC7A9P82251 487 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 USP4Q13107 963 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 RAB6CQ53S08 254 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 SH3PXD2AQ5TCZ1 1133 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 DAB2IPQ5VWQ8 1189 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 SND1Q7KZF4 910 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 OTOP3Q7RTS5 596 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 ARID3BQ8IVW6 561 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 ST13P5Q8NFI4 369 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 FNIP1Q8TF40 1166 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 ACSF2Q96CM8 615 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 ADAM33Q9BZ11 813 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 RAB6CQ9H0N0 254 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 GOLPH3Q9H4A6 298 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 PIGVQ9NUD9 493 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 GDE1Q9NZC3 331 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 CALCOCO1Q9P1Z2 691 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 CFAP97Q9P2B7 532 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 SALL4Q9UJQ4 1053 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 ARHGAP26Q9UNA1 814 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 CCL26Q9Y258 94 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 TLR6Q9Y2C9 796 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 SH3BP1Q9Y3L3 701 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 PAXBP1Q9Y5B6 917 aa14.13□□□□□ -0.15
CPNE1-227ENST00000498056 SPTBN5Q9NRC6 3674 aaKnown RBP14.13□□□□□ -0.15
CPNE1-227ENST00000498056 USP27XA6NNY8 438 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 BTNL10A8MVZ5 291 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 BUB1BO60566 1050 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 RNF8O76064 485 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 IGLV3-25P01717 112 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 ARHGAP25P42331 645 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 KCNQ1P51787 676 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 TRIP4Q15650 581 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 SMAD2Q15796 467 aaKnown RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 IFI16Q16666 785 aaKnown RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 FAM78AQ5JUQ0 283 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 SCYL2Q6P3W7 929 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 POTEHQ6S545 545 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 STRADAQ7RTN6 431 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 FAM131BQ86XD5 332 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms