RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 FAM53CQ9NYF3 392 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 PCDHB5Q9Y5E4 795 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 MTMR11A4FU01 709 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 NT5C1B-RDH14C9J2C7 533 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 H3BRJ5 948 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 H7C4K7 107 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 ENDOD1O94919 500 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 IFNB1P01574 187 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 AMHP03971 560 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 FGFR3P22607 806 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 KLRC2P26717 231 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 ADCY8P40145 1251 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 ITGA8P53708 1063 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 AIF1P55008 147 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 C1QTNF8P60827 252 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 CBX1P83916 185 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 CAV1Q03135 178 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 P3H1Q32P28 736 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 ANKRD20A8PQ5CZ79 823 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 SPOUT1Q5T280 376 aaKnown RBP8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 SYPL2Q5VXT5 272 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 SLC9A4Q6AI14 798 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 VSTM1Q6UX27 236 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 NPNTQ6UXI9 565 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 BNIPLQ7Z465 357 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 TAC4Q86UU9 113 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 CCDC25Q86WR0 208 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 TMEM173Q86WV6 379 aaPredicted RBP8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 PSTKQ8IV42 348 aaKnown RBP8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 CDKL3Q8IVW4 592 aaPredicted RBP8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 ADAM32Q8TC27 787 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 RNF139Q8WU17 664 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 BCL7CQ8WUZ0 217 aaPredicted RBP8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 RSAD2Q8WXG1 361 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 EDEM1Q92611 657 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 P3H4Q92791 437 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 ART4Q93070 314 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 NTAN1Q96AB6 310 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 ZBTB9Q96C00 473 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 PAWRQ96IZ0 340 aaKnown RBP8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 B3GALT6Q96L58 329 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 PGLYRP2Q96PD5 576 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 RNF157Q96PX1 679 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 TMEM121Q9BTD3 319 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 GPR62Q9BZJ7 368 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 PIGVQ9NUD9 493 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 DDIT4Q9NX09 232 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 CALCOCO1Q9P1Z2 691 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 RCOR3Q9P2K3 495 aaPredicted RBP8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 FZD10Q9ULW2 581 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 NAALADL1Q9UQQ1 740 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 PLAAQ9Y263 795 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 ATP8A1Q9Y2Q0 1164 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 C2orf16Q68DN1 1984 aa8.39□□□□□ -1.07
PDZRN3-212ENST00000498048 CEP350Q5VT06 3117 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 DOCK6Q96HP0 2047 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 ABHD14A-ACY1A0A1B0GW23 586 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 H7C0C1 242 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 EEF2KO00418 725 aaKnown RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 DNALI1O14645 258 aaPredicted RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 IRAK2O43187 625 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 MFSD11O43934 449 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 OPA1O60313 960 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 EFCAB14O75071 495 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 RNF40O75150 1001 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 PPFIA2O75334 1257 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 ALDH2P05091 517 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 GALTP07902 379 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 HSPA1AP0DMV8 641 aaKnown RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 HSPA1BP0DMV9 641 aaKnown RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 RBP3P10745 1247 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 RAG1P15918 1043 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 ZFXP17010 805 aaPredicted RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 GOT1P17174 413 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 L1CAMP32004 1257 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 HSD17B3P37058 310 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 GGCXP38435 758 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 MAGEA11P43364 429 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 ATP5OP48047 213 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 GPR15P49685 360 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 LBX1P52954 281 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 PMS2P54278 862 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 ARPP19P56211 112 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 TPI1P60174 286 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 YWHAGP61981 247 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 DEFB103AP81534 67 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 SCAPQ12770 1279 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 GPS1Q13098 491 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 SLMAPQ14BN4 828 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 UAP1Q16222 522 aaPredicted RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 PSMD5Q16401 504 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 SPDYCQ5MJ68 293 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 RTP2Q5QGT7 225 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 BTBD8Q5XKL5 378 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 ALS2CLQ60I27 953 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 DENND2CQ68D51 928 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 C1orf228Q6PIY5 440 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 CEP128Q6ZU80 1094 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms