RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 FAM234BA2RU67 622 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 TMEM232C9JQI7 657 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 CLIC1O00299 241 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 INSIG1O15503 277 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 ZSCAN9O15535 394 aaPredicted RBP4.43□□□□□ -1.7
CD46-218ENST00000496723 EGR1P18146 543 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 EEF1GP26641 437 aaKnown RBP4.43□□□□□ -1.7
CD46-218ENST00000496723 SLC5A2P31639 672 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 CCKBRP32239 447 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 PBX1P40424 430 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 MMP13P45452 471 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 PLCD1P51178 756 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 POLGP54098 1239 aaPredicted RBP4.43□□□□□ -1.7
CD46-218ENST00000496723 GPC5P78333 572 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 CCDC15Q0P6D6 951 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 KCNB1Q14721 858 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 MFSD13AQ14CX5 517 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 LARS2Q15031 903 aaKnown RBP4.43□□□□□ -1.7
CD46-218ENST00000496723 SUPT20HL1Q3ZLR7 823 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 IZUMO3Q5VZ72 239 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
CD46-218ENST00000496723 MIS18BP1Q6P0N0 1132 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 FBXO38Q6PIJ6 1188 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 SRLQ86TD4 932 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 KRT73Q86Y46 540 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 GLIS1Q8NBF1 620 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 GRAMD1AQ96CP6 724 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 EDC3Q96F86 508 aaKnown RBP4.43□□□□□ -1.7
CD46-218ENST00000496723 PRR11Q96HE9 360 aaPredicted RBP4.43□□□□□ -1.7
CD46-218ENST00000496723 WDR24Q96S15 920 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 EFHD1Q9BUP0 239 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 PRSS22Q9GZN4 317 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.43□□□□□ -1.7
CD46-218ENST00000496723 PDGFCQ9NRA1 345 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 ELOVL5Q9NYP7 299 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 RGL1Q9NZL6 768 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 FNIP2Q9P278 1114 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 WDR17Q8IZU2 1322 aa4.43□□□□□ -1.7
CD46-218ENST00000496723 CYP2D7A0A087X1C5 515 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.42□□□□□ -1.7
CD46-218ENST00000496723 H3BNC9 293 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 PODXLO00592 558 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 FYB1O15117 783 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 PLIN1O60240 522 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 PRAMEF2O60811 474 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 CBFA2T3O75081 653 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 PECAM1P16284 738 aaPredicted RBP4.42□□□□□ -1.7
CD46-218ENST00000496723 ATF7P17544 494 aaPredicted RBP4.42□□□□□ -1.7
CD46-218ENST00000496723 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
CD46-218ENST00000496723 SLC5A9Q2M3M2 681 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 AASDHQ4L235 1098 aaPredicted RBP4.42□□□□□ -1.7
CD46-218ENST00000496723 ARHGAP15Q53QZ3 475 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 VSTM1Q6UX27 236 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 RANBP10Q6VN20 620 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 CCDC146Q8IYE0 955 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 GALNT16Q8N428 558 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.42□□□□□ -1.7
CD46-218ENST00000496723 KIAA1191Q96A73 305 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 SGCZQ96LD1 299 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 GDF15Q99988 308 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 CINPQ9BW66 212 aaPredicted RBP4.42□□□□□ -1.7
CD46-218ENST00000496723 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 SAP30LQ9HAJ7 183 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 VPS45Q9NRW7 570 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 GAR1Q9NY12 217 aaKnown RBP4.42□□□□□ -1.7
CD46-218ENST00000496723 PCDHGB2Q9Y5G2 931 aa4.42□□□□□ -1.7
CD46-218ENST00000496723 VIPP01282 170 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 TMIGD3P0DMS9 266 aaPredicted RBP4.41□□□□□ -1.7
CD46-218ENST00000496723 DRD1P21728 446 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 GALNSP34059 522 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 ARHGAP25P42331 645 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 NR4A2P43354 598 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 HSPA7P48741 367 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 DGKQP52824 942 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 BFSP2Q13515 415 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 DNASE1L3Q13609 305 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 RAPGEF1Q13905 1077 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 KCNJ12Q14500 433 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 ZNF268Q14587 947 aaPredicted RBP4.41□□□□□ -1.7
CD46-218ENST00000496723 MAPKAPK3Q16644 382 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 MPEG1Q2M385 716 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 TMEM196Q5HYL7 178 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 CC2D1BQ5T0F9 858 aaKnown RBP4.41□□□□□ -1.7
CD46-218ENST00000496723 PXDC1Q5TGL8 231 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 ZNF813Q6ZN06 617 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 CNGA4Q8IV77 575 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 FAM186BQ8IYM0 893 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 DEPTORQ8TB45 409 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 PNISRQ8TF01 805 aaKnown RBP4.41□□□□□ -1.7
CD46-218ENST00000496723 KAZALD1Q96I82 304 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 VPS16Q9H269 839 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 CHST12Q9NRB3 414 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 KLHL13Q9P2N7 655 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 FZD4Q9ULV1 537 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 VPS4AQ9UN37 437 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 PCDHB2Q9Y5E7 798 aa4.41□□□□□ -1.7
CD46-218ENST00000496723 SMIM35A0A1B0GVV1 85 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 OR2W5A6NFC9 320 aa4.4□□□□□ -1.71
CD46-218ENST00000496723 HNRNPDLO14979 420 aaKnown RBP4.4□□□□□ -1.71
CD46-218ENST00000496723 RNF8O76064 485 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms