RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 APOL1O14791 398 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 TRIM66O15016 1216 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 ATF2P15336 505 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 EIF3EP60228 445 aaKnown RBP17.02■□□□□ 0.31
HLA-A-208ENST00000496081 WDR5P61964 334 aaKnown RBP17.02■□□□□ 0.31
HLA-A-208ENST00000496081 YWHAGP61981 247 aaKnown RBP eCLIP17.02■□□□□ 0.31
HLA-A-208ENST00000496081 RNF168Q8IYW5 571 aaPredicted RBP17.02■□□□□ 0.31
HLA-A-208ENST00000496081 TMEM199Q8N511 208 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 STKLD1Q8NE28 680 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 LRRC45Q96CN5 670 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 CSPG4P5Q96PW8 444 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 TXLNGYQ9BZA5 131 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 FAM129AQ9BZQ8 928 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 DDIT4Q9NX09 232 aa17.02■□□□□ 0.31
HLA-A-208ENST00000496081 CWC15Q9P013 229 aaKnown RBP17.02■□□□□ 0.31
HLA-A-208ENST00000496081 AGPSO00116 658 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 SGK1O00141 431 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 MCF2LO15068 1137 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 VNN2O95498 520 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 F9P00740 461 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 ZSCAN5DPP0CG00 497 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 ACRP10323 421 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 RBP3P10745 1247 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 ETS1P14921 441 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 CAPN2P17655 700 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 TGM2P21980 687 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 ADRA1BP35368 520 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 PGFP49763 221 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 DHX9Q08211 1270 aaKnown RBP17.01■□□□□ 0.31
HLA-A-208ENST00000496081 USP41Q3LFD5 358 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 C1orf228Q6PIY5 440 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 KCNT2Q6UVM3 1135 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 RNF19BQ6ZMZ0 732 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 SCD5Q86SK9 330 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 IQCKQ8N0W5 287 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 NUP93Q8N1F7 819 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 PIK3R5Q8WYR1 880 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 NTAN1Q96AB6 310 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 TRIM62Q9BVG3 475 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 OXCT2Q9BYC2 517 aaPredicted RBP17.01■□□□□ 0.31
HLA-A-208ENST00000496081 FAM204AQ9H8W3 233 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 ANLNQ9NQW6 1124 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.01■□□□□ 0.31
HLA-A-208ENST00000496081 FBXW11Q9UKB1 542 aa17.01■□□□□ 0.31
HLA-A-208ENST00000496081 MYO16Q9Y6X6 1858 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 GOLGA6BA6NDN3 693 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 H3BQF6 201 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 I6L893 689 aaPredicted RBP17■□□□□ 0.31
HLA-A-208ENST00000496081 EFCAB14O75071 495 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 PPFIA2O75334 1257 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 GOT1P17174 413 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 HSD17B3P37058 310 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 ITGA8P53708 1063 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 AIF1P55008 147 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 GDF10P55107 478 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 SMARCB1Q12824 385 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 UAP1Q16222 522 aaPredicted RBP17■□□□□ 0.31
HLA-A-208ENST00000496081 ALS2CLQ60I27 953 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 RHBDF2Q6PJF5 856 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 TAC4Q86UU9 113 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 SPPL2BQ8TCT7 592 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 CCHCR1Q8TD31 782 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 DQX1Q8TE96 717 aaKnown RBP17■□□□□ 0.31
HLA-A-208ENST00000496081 CRISPLD1Q9H336 500 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 NMUR1Q9HB89 426 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 ABCC13Q9NSE7 274 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 RCOR3Q9P2K3 495 aaPredicted RBP17■□□□□ 0.31
HLA-A-208ENST00000496081 MTRF1LQ9UGC7 380 aaKnown RBP17■□□□□ 0.31
HLA-A-208ENST00000496081 SLC27A5Q9Y2P5 690 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 SOAT2O75908 522 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 GGCXP38435 758 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 ARL4AP40617 200 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 CXCR3P49682 368 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 SCAPQ12770 1279 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 GPS2Q13227 327 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 P3H1Q32P28 736 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 EFHC2Q5JST6 749 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 SPOUT1Q5T280 376 aaKnown RBP17■□□□□ 0.31
HLA-A-208ENST00000496081 CFAP58Q5T655 872 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 BTBD8Q5XKL5 378 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 ZC3H18Q86VM9 953 aaKnown RBP17■□□□□ 0.31
HLA-A-208ENST00000496081 UNC45BQ8IWX7 931 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 FBXO22Q8NEZ5 403 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 RIN2Q8WYP3 895 aaPredicted RBP17■□□□□ 0.31
HLA-A-208ENST00000496081 PCDH9Q9HC56 1237 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 MTRRQ9UBK8 725 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 ANAPC5Q9UJX4 755 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 SCML2Q9UQR0 700 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 HEY1Q9Y5J3 304 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 CDY1Q9Y6F8 540 aa17■□□□□ 0.31
HLA-A-208ENST00000496081 ADAM12O43184 909 aa16.99■□□□□ 0.31
HLA-A-208ENST00000496081 IFNB1P01574 187 aa16.99■□□□□ 0.31
HLA-A-208ENST00000496081 IGLV3-25P01717 112 aa16.99■□□□□ 0.31
HLA-A-208ENST00000496081 AMPD1P23109 780 aa16.99■□□□□ 0.31
HLA-A-208ENST00000496081 USP46P62068 366 aa16.99■□□□□ 0.31
HLA-A-208ENST00000496081 FAM193AP78312 1265 aa16.99■□□□□ 0.31
HLA-A-208ENST00000496081 CBX1P83916 185 aa16.99■□□□□ 0.31
HLA-A-208ENST00000496081 EIF4EBP2Q13542 120 aaPredicted RBP16.99■□□□□ 0.31
HLA-A-208ENST00000496081 IZUMO3Q5VZ72 239 aa16.99■□□□□ 0.31
HLA-A-208ENST00000496081 SLC8B1Q6J4K2 584 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms