RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 UTP11Q9Y3A2 253 aaKnown RBP25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 GREB1Q4ZG55 1949 aa25.36■■□□□ 1.65
PPP1R3F-205ENST00000495799 CST8O60676 142 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 LILRB3O75022 631 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 CD48P09326 243 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 CSH1P0DML2 217 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 CSH2P0DML3 217 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 H2AFXP16104 143 aaPredicted RBP25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 ATF6P18850 670 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 CA8P35219 290 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 ARL4AP40617 200 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 ZNF135P52742 658 aaPredicted RBP25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 SLC7A5Q01650 507 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 LMNB2Q03252 620 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 UBE3AQ05086 875 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 SCAPQ12770 1279 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 VEPH1Q14D04 833 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 MSANTD2Q6P1R3 559 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 DRICH1Q6PGQ1 229 aaPredicted RBP25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 C1orf54Q8WWF1 131 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 SLCO2A1Q92959 643 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 SERPINB11Q96P15 392 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 WDR6Q9NNW5 1121 aaKnown RBP25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 DMGDHQ9UI17 866 aaKnown RBP25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 FBXW11Q9UKB1 542 aa25.35■■□□□ 1.65
PPP1R3F-205ENST00000495799 PRRG1O14668 218 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 IGLV3-25P01717 112 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 ZFXP17010 805 aaPredicted RBP25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 TNFRSF8P28908 595 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 L1CAMP32004 1257 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 CXCR3P49682 368 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 USP46P62068 366 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 PLD1Q13393 1074 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 MAP9Q49MG5 647 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 PPP6R3Q5H9R7 873 aaPredicted RBP25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 BRMS1LQ5PSV4 323 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 SYDE1Q6ZW31 735 aaPredicted RBP25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 TMC7Q7Z402 723 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 ADAM32Q8TC27 787 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 GIPC2Q8TF65 315 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 RNF34Q969K3 372 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 FAF2Q96CS3 445 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 RNF157Q96PX1 679 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 CDK5RAP1Q96SZ6 601 aaKnown RBP25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 EMILIN2Q9BXX0 1053 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 WDCPQ9H6R7 721 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 NMUR1Q9HB89 426 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 YIPF1Q9Y548 306 aa25.34■■□□□ 1.65
PPP1R3F-205ENST00000495799 PLXNA4Q9HCM2 1894 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 H3BRJ5 948 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 TTI1O43156 1089 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 IRAK2O43187 625 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 ECEL1O95672 775 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 GAS8O95995 478 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 ADRA1BP35368 520 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 VSNL1P62760 191 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 GUCY2DQ02846 1103 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 TAF10Q12962 218 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 ANKRD20A8PQ5CZ79 823 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 TCEAL8Q8IYN2 117 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 ATL2Q8NHH9 583 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 GPR152Q8TDT2 470 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 HDAC7Q8WUI4 952 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 AUTS2Q8WXX7 1259 aa25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 ZNF638Q14966 1978 aaKnown RBP25.33■■□□□ 1.65
PPP1R3F-205ENST00000495799 LCHNA4D1U4 455 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 LINC01553A4QN01 128 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 APOC4-APOC2K7ER74 178 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 TEX28O15482 410 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 SEC24AO95486 1093 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 CXCL14O95715 111 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 APOC2P02655 101 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 RB1P06400 928 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 ADH1AP07327 375 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 TGM2P21980 687 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 TAF12Q16514 161 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 CA9Q16790 459 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 TTC27Q6P3X3 843 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 TADA2BQ86TJ2 420 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 STKLD1Q8NE28 680 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 SAMD11Q96NU1 681 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 KCTD15Q96SI1 283 aaPredicted RBP25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 UBE2OQ9C0C9 1292 aaKnown RBP25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 GDF3Q9NR23 364 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 R3HDM2Q9Y2K5 976 aaKnown RBP25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 APOL1O14791 398 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 LPXNO60711 386 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 SNX1Q13596 522 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 FBXO38Q6PIJ6 1188 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 JAMLQ86YT9 394 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 CCDC114Q96M63 670 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 EPB41L5Q9HCM4 733 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 ENTPD7Q9NQZ7 604 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 MAGED2Q9UNF1 606 aaPredicted RBP25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 IRAK3Q9Y616 596 aa25.32■■□□□ 1.64
PPP1R3F-205ENST00000495799 MKI67P46013 3256 aaKnown RBP25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 C5orf67F2Z3F1 127 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 LIASO43766 372 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 RARGP13631 454 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms