RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 KRT82Q9NSB4 513 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 DNAJC17Q9NVM6 304 aaKnown RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 DMAC2Q9NW81 257 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 WDR35Q9P2L0 1181 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 FBXO10Q9UK96 956 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 SCML2Q9UQR0 700 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 TRAF3IP3Q9Y228 551 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 PLXND1Q9Y4D7 1925 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 TNRC6BQ9UPQ9 1833 aaKnown RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 DSPP15924 2871 aaKnown RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 ASCC3Q8N3C0 2202 aaKnown RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 ITPR1Q14643 2758 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 THADAQ6YHU6 1953 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 PCDH15Q96QU1 1955 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 SMTNL1A8MU46 457 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 PRRT4C9JH25 899 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 HHLA1C9JL84 531 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 NEDD8-MDP1E9PL57 170 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 GFRA2O00451 464 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 EXOC3O60645 756 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 PHACTR2O75167 634 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 TBX18O95935 607 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 CISD3P0C7P0 127 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 IRF1P10914 325 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 CCDC130P13994 396 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 HOXB3P14651 431 aaPredicted RBP9.27□□□□□ -0.93
SORT1-208ENST00000495777 TYRP14679 529 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 WASP42768 502 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 PRCPP42785 496 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 ATXN3P54252 364 aaPredicted RBP9.27□□□□□ -0.93
SORT1-208ENST00000495777 FAM193AP78312 1265 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 FKBP3Q00688 224 aaKnown RBP9.27□□□□□ -0.93
SORT1-208ENST00000495777 ENPEPQ07075 957 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 BIRC3Q13489 604 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 ZNF423Q2M1K9 1284 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 ZACNQ401N2 412 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 Q6ZNB5 142 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 TOGARAM2Q6ZUX3 1019 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 ACOT1Q86TX2 421 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 METTL3Q86U44 580 aaKnown RBP9.27□□□□□ -0.93
SORT1-208ENST00000495777 UNC93AQ86WB7 457 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 SLC9A9Q8IVB4 645 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 FAM114A1Q8IWE2 563 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 CHPFQ8IZ52 775 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 DEFB119Q8N690 84 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 SLC2A14Q8TDB8 520 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 TAF4BQ92750 862 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 P2RY11Q96G91 374 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 MRGPRX1Q96LB2 322 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 XPO6Q96QU8 1125 aaKnown RBP9.27□□□□□ -0.93
SORT1-208ENST00000495777 GTPBP2Q9BX10 602 aaKnown RBP9.27□□□□□ -0.93
SORT1-208ENST00000495777 BBS2Q9BXC9 721 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 PNPLA8Q9NP80 782 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 TLR8Q9NR97 1041 aaKnown RBP9.27□□□□□ -0.93
SORT1-208ENST00000495777 OSER1Q9NX31 292 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 HMGXB4Q9UGU5 601 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 RWDD2AQ9UIY3 292 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 NFE2L3Q9Y4A8 694 aa9.27□□□□□ -0.93
SORT1-208ENST00000495777 ANKRD11Q6UB99 2663 aaPredicted RBP9.26□□□□□ -0.93
SORT1-208ENST00000495777 BIN1O00499 593 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 IKBKBO14920 756 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 MAPK13O15264 365 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 GNA14O95837 355 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 ASS1P00966 412 aaKnown RBP9.26□□□□□ -0.93
SORT1-208ENST00000495777 SYPP08247 313 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 P4HA1P13674 534 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 ATP5C1P36542 298 aaKnown RBP9.26□□□□□ -0.93
SORT1-208ENST00000495777 ASPAP45381 313 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 NDST1P52848 882 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 MAP3K7CLP57077 242 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 RING1Q06587 406 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 INCA1Q0VD86 236 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 ENPP2Q13822 863 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 SGSM1Q2NKQ1 1148 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 DPCR1Q3MIW9 517 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 SDE2Q6IQ49 451 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 SCARA5Q6ZMJ2 495 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 CLEC20AQ6ZU45 233 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 GPRIN1Q7Z2K8 1008 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 ZNF276Q8N554 614 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 C12orf29Q8N999 325 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 OR2I1PQ8NGU4 316 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 DNASE2BQ8WZ79 361 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 FOXJ1Q92949 421 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 ELMO3Q96BJ8 720 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 HSPA12BQ96MM6 686 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 CEP63Q96MT8 703 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 HNRNPABQ99729 332 aaKnown RBP9.26□□□□□ -0.93
SORT1-208ENST00000495777 FUCA2Q9BTY2 467 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 NACA2Q9H009 215 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 TSPY26PQ9H489 355 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 FAM124BQ9H5Z6 455 aaPredicted RBP9.26□□□□□ -0.93
SORT1-208ENST00000495777 CD93Q9NPY3 652 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.26□□□□□ -0.93
SORT1-208ENST00000495777 USP36Q9P275 1121 aaKnown RBP9.26□□□□□ -0.93
SORT1-208ENST00000495777 SUSD2Q9UGT4 822 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 CYP8B1Q9UNU6 501 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 SLC27A6Q9Y2P4 619 aa9.26□□□□□ -0.93
SORT1-208ENST00000495777 SMG1Q96Q15 3661 aaKnown RBP9.25□□□□□ -0.93
SORT1-208ENST00000495777 BECN2A8MW95 431 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms