RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 NME7Q9Y5B8 376 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 NFS1Q9Y697 457 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 VWA8A3KMH1 1905 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 HIDE1A8MVS5 230 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 APOC4-APOC2K7ER74 178 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 PAPSS1O43252 624 aaPredicted RBP16.94■□□□□ 0.3
CBX4-204ENST00000495122 KRT14P02533 472 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 APOC2P02655 101 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 CYP11A1P05108 521 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 ODC1P11926 461 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 TCF4P15884 667 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 PTPN1P18031 435 aaKnown RBP16.94■□□□□ 0.3
CBX4-204ENST00000495122 KLRC2P26717 231 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 BCAR1P56945 870 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 SNX1Q13596 522 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 DAB2IPQ5VWQ8 1189 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 DENND2CQ68D51 928 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 TMEM184AQ6ZMB5 413 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 AGMOQ6ZNB7 445 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 STRADAQ7RTN6 431 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 PCGF5Q86SE9 256 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 ARFGAP2Q8N6H7 521 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 EMC1Q8N766 993 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 ATG4AQ8WYN0 398 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 CENPIQ92674 756 aaPredicted RBP16.94■□□□□ 0.3
CBX4-204ENST00000495122 GAD1Q99259 594 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 DPEP3Q9H4B8 488 aa16.94■□□□□ 0.3
CBX4-204ENST00000495122 NGRNQ9NPE2 291 aaKnown RBP16.94■□□□□ 0.3
CBX4-204ENST00000495122 USP15Q9Y4E8 981 aaPredicted RBP16.94■□□□□ 0.3
CBX4-204ENST00000495122 PRR33A8MZF0 331 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 NPR3P17342 541 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 IL1R2P27930 398 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 FLT3P36888 993 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 ADCY8P40145 1251 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 ARSEP51690 589 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 SKOR1P84550 965 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 CCDC14Q49A88 953 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 ATP13A4Q4VNC1 1196 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 CEP85LQ5SZL2 805 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 GLB1LQ6UWU2 654 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 GSTA5Q7RTV2 222 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 OSTM1Q86WC4 334 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 METTL23Q86XA0 190 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 SLC2A14Q8TDB8 520 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 ZFP42Q96MM3 310 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 ZNF670Q9BS34 389 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 DDX23Q9BUQ8 820 aaKnown RBP16.93■□□□□ 0.3
CBX4-204ENST00000495122 STMN4Q9H169 189 aaPredicted RBP16.93■□□□□ 0.3
CBX4-204ENST00000495122 NRDE2Q9H7Z3 1164 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 ZWILCHQ9H900 591 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 GOLGA2P5Q9HBQ8 144 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 TBC1D13Q9NVG8 400 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 TMEM51Q9NW97 253 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 ANAPC5Q9UJX4 755 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 ZNF148Q9UQR1 794 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 ATP8A1Q9Y2Q0 1164 aa16.93■□□□□ 0.3
CBX4-204ENST00000495122 DOCK8Q8NF50 2099 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 CFAP69A5D8W1 941 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 NT5C1B-RDH14C9J2C7 533 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 DAB1O75553 588 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 PDGFRBP09619 1106 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 SRGAP2BP0DMP2 458 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 CCDC130P13994 396 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 ZFXP17010 805 aaPredicted RBP16.92■□□□□ 0.3
CBX4-204ENST00000495122 TGM2P21980 687 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 LMO2P25791 158 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 ADORA2BP29275 332 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 RGS7P49802 495 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 ADCY2Q08462 1091 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 ZNF844Q08AG5 666 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 TUSC3Q13454 348 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 UPP1Q16831 310 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 NOMO2Q5JPE7 1267 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 KAZNQ674X7 775 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 TXNRD3NBQ6F5E7 133 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 DSTYKQ6XUX3 929 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 TMC7Q7Z402 723 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 TMEM173Q86WV6 379 aaPredicted RBP16.92■□□□□ 0.3
CBX4-204ENST00000495122 SCML4Q8N228 414 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 SUSD6Q92537 303 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 MAK16Q9BXY0 300 aaKnown RBP16.92■□□□□ 0.3
CBX4-204ENST00000495122 ROPN1BQ9BZX4 212 aaPredicted RBP16.92■□□□□ 0.3
CBX4-204ENST00000495122 ZBP1Q9H171 429 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 ROPN1Q9HAT0 212 aaPredicted RBP16.92■□□□□ 0.3
CBX4-204ENST00000495122 RRN3Q9NYV6 651 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.92■□□□□ 0.37e-6■■■■□ 21.6
CBX4-204ENST00000495122 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.92■□□□□ 0.3
CBX4-204ENST00000495122 RCOR3Q9P2K3 495 aaPredicted RBP16.92■□□□□ 0.3
CBX4-204ENST00000495122 SHOC2Q9UQ13 582 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 HCN4Q9Y3Q4 1203 aa16.92■□□□□ 0.3
CBX4-204ENST00000495122 WDFY4Q6ZS81 3184 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 CARNS1A5YM72 827 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 SRRM3A6NNA2 597 aaPredicted RBP16.91■□□□□ 0.3
CBX4-204ENST00000495122 LOC730098B7Z3J9 87 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 DNALI1O14645 258 aaPredicted RBP16.91■□□□□ 0.3
CBX4-204ENST00000495122 MCF2LO15068 1137 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 B4GALT3O60512 393 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 CST8O60676 142 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 FAM200BP0CF97 657 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 KRT10P13645 584 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms