RNA–Protein interactions for RNA: ENST00000495090.6

SYNE1-230, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-230ENST00000495090 TCEAL9Q9UHQ7 104 aa10.01□□□□□ -0.81
SYNE1-230ENST00000495090 AGO2Q9UKV8 859 aaKnown RBP10.01□□□□□ -0.81
SYNE1-230ENST00000495090 AP4B1Q9Y6B7 739 aa10.01□□□□□ -0.81
SYNE1-230ENST00000495090 AK5Q9Y6K8 562 aa10.01□□□□□ -0.81
SYNE1-230ENST00000495090 HMX2A2RU54 273 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 H0YJX3 145 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 TOM1L1O75674 476 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 ICAM1P05362 532 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 FAM58BPP0C7Q3 252 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 SRGAP2CP0DJJ0 459 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 CSH1P0DML2 217 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 CSH2P0DML3 217 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 SRGAP2BP0DMP2 458 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 KRT3P12035 628 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 CDH2P19022 906 aaPredicted RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 SSTR3P32745 418 aaPredicted RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 RFC1P35251 1148 aaPredicted RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 HSPA2P54652 639 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 WNT7BP56706 349 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 NLRP11P59045 1033 aaKnown RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 RAB15P59190 212 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 MYBPC1Q00872 1141 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 MTM1Q13496 603 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 TFDP2Q14188 446 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 SMTNL2Q2TAL5 461 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 DARS2Q6PI48 645 aaKnown RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 PODNQ7Z5L7 613 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 CAND1Q86VP6 1230 aaKnown RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 MAP7D3Q8IWC1 876 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 WDTC1Q8N5D0 677 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 POU5F2Q8N7G0 328 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 KCTD6Q8NC69 237 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 FNDC8Q8TC99 324 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 ZNF526Q8TF50 670 aaPredicted RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 TFB1MQ8WVM0 346 aaKnown RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 DLG3Q92796 817 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 CCDC124Q96CT7 223 aaKnown RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 HAUS8Q9BT25 410 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 SLC2A11Q9BYW1 496 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 INO80BQ9C086 356 aaPredicted RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 GRIP2Q9C0E4 1043 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 KLC2Q9H0B6 622 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 LHX5Q9H2C1 402 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 RHBDL2Q9NX52 303 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 RBAKQ9NYW8 714 aaPredicted RBP10□□□□□ -0.81
SYNE1-230ENST00000495090 ZNHIT2Q9UHR6 403 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 NR2E3Q9Y5X4 410 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 SQORQ9Y6N5 450 aa10□□□□□ -0.81
SYNE1-230ENST00000495090 SLC15A5A6NIM6 579 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ZNF195O14628 629 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ADCY3O60266 1144 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ATP6V1G1O75348 118 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 CCNE2O96020 404 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ASS1P00966 412 aaKnown RBP9.99□□□□□ -0.81
SYNE1-230ENST00000495090 FAM163BP0C2L3 166 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 COX4I1P13073 169 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 SLC5A2P31639 672 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 HARS2P49590 506 aaKnown RBP9.99□□□□□ -0.81
SYNE1-230ENST00000495090 NUMBP49757 651 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 GRM1Q13255 1194 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 BMPR2Q13873 1038 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 INSCQ1MX18 579 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 FAXCQ5TGI0 409 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 GPAT2Q6NUI2 795 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 UNC5AQ6ZN44 842 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ZCCHC23Q6ZST2 131 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 FRMD7Q6ZUT3 714 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 MAVSQ7Z434 540 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 SLC4A11Q8NBS3 891 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 STON2Q8WXE9 905 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 RSPH1Q8WYR4 309 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 FAM84AQ96KN4 292 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 CEP170P1Q96L14 293 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 LRGUKQ96M69 825 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 MRPL1Q9BYD6 325 aaKnown RBP9.99□□□□□ -0.81
SYNE1-230ENST00000495090 SDCBP2Q9H190 292 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 RAB6BQ9NRW1 208 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 RIMS3Q9UJD0 308 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-230ENST00000495090 SH3GLB1Q9Y371 365 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 CEPT1Q9Y6K0 416 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 CNTNAP2Q9UHC6 1331 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 SIP14410 1827 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 CCDC160A6NGH7 325 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 E9PBE3 544 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 GPR25O00155 361 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 SLC22A2O15244 555 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ITM2AO43736 263 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 PLIN3O60664 434 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 AVILO75366 819 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 SORBS2O94875 1100 aaKnown RBP9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ATG7O95352 703 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 GYS1P13807 737 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 IDO1P14902 403 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ZNF23P17027 643 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 CD97P48960 835 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 ACADVLP49748 655 aa9.99□□□□□ -0.81
SYNE1-230ENST00000495090 CDK9P50750 372 aaKnown RBP9.99□□□□□ -0.81
SYNE1-230ENST00000495090 YWHAEP62258 255 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms