RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 SREBF1P36956 1147 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 MAGEA10P43363 369 aaPredicted RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 NRIP1P48552 1158 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 CDH8P55286 799 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 ARF5P84085 180 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 GRIN1Q05586 938 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 CDK5R2Q13319 367 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 SMAD4Q13485 552 aaKnown RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 PTK6Q13882 451 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 RCN2Q14257 317 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 PCLAFQ15004 111 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 CBWD5Q5RIA9 395 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 SARM1Q6SZW1 724 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 ZDHHC24Q6UX98 284 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 TMC5Q6UXY8 1006 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 RGS9BPQ6ZS82 235 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 LPCAT2Q7L5N7 544 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 MIB1Q86YT6 1006 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 FAM71DQ8N9W8 422 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 FSIP1Q8NA03 581 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 FAM216AQ8WUB2 273 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 SNX33Q8WV41 574 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 ANP32BQ92688 251 aaKnown RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 MR1Q95460 341 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 FCRL2Q96LA5 508 aaPredicted RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 FAM118BQ9BPY3 351 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 NTPCRQ9BSD7 190 aaKnown RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 POLR3CQ9BUI4 534 aaPredicted RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 DUSP23Q9BVJ7 150 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 STN1Q9H668 368 aaKnown RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 RMI1Q9H9A7 625 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 MRPL44Q9H9J2 332 aaKnown RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 SEMA4BQ9NPR2 832 aaPredicted RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 CFAP97Q9P2B7 532 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 SEC63Q9UGP8 760 aaKnown RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 CPSF3Q9UKF6 684 aaKnown RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 BAG5Q9UL15 447 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 EXOC7Q9UPT5 735 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 AURKCQ9UQB9 309 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 PIN4Q9Y237 131 aaKnown RBP7.18□□□□□ -1.26
SNX13-210ENST00000494402 TBC1D30Q9Y2I9 924 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 IGSF1Q8N6C5 1336 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 COL15A1P39059 1388 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 A0A1W2PR48 441 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 A0A1W2PRV1 198 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 TMEM82A0PJX8 343 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 FRMD3A2A2Y4 597 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 PRR33A8MZF0 331 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 H0YC42 278 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 DNM1LO00429 736 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 GRM6O15303 877 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 RTN2O75298 545 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 LARGE1O95461 756 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 MPIG6BO95866 241 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 PROCP04070 461 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 ABCB1P08183 1280 aaPredicted RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 WEE2P0C1S8 567 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 APEX1P27695 318 aaKnown RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 ICAM3P32942 547 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 MSX2P35548 267 aaPredicted RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 IFNAR2P48551 515 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 LUMP51884 338 aaPredicted RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 CDH15P55291 814 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 EIF3BP55884 814 aaKnown RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 CORO7P57737 925 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 GOLGA8DPQ0D2H9 430 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 MTM1Q13496 603 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 ITGA7Q13683 1181 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 ZKSCAN8Q15776 578 aaPredicted RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 INSCQ1MX18 579 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 NHSL2Q5HYW2 709 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 CCDC183Q5T5S1 534 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 FCRL6Q6DN72 434 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 TTI2Q6NXR4 508 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 DENND1BQ6P3S1 775 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 DRICH1Q6PGQ1 229 aaPredicted RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 SUSD1Q6UWL2 747 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 ABHD15Q6UXT9 468 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 LINC00696Q6ZRV3 163 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 MSANTD1Q6ZTZ1 278 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 C8orf86Q6ZUL3 223 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 IQCF2Q8IXL9 164 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 FAM217AQ8IXS0 508 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 ZNF366Q8N895 744 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 GMCL1P1Q8NEA9 526 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 OR7D4Q8NG98 312 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 NOC3LQ8WTT2 800 aaKnown RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 ZNF480Q8WV37 535 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 KCNE4Q8WWG9 221 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 MRPS27Q92552 414 aaKnown RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 ZNF75CPQ92670 426 aaPredicted RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 PRAM1Q96QH2 718 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 WDR24Q96S15 920 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 NAA11Q9BSU3 229 aaPredicted RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 FAM83DQ9H4H8 585 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 NCOR1P1Q9H4R4 102 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 LDAHQ9H6V9 325 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 C17orf75Q9HAS0 396 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 PLEKHA2Q9HB19 425 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 BARX1Q9HBU1 254 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms