RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TCERG1LQ5VWI1 586 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 TIGD7Q6NT04 549 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-219ENST00000494323 TMEM151BQ8IW70 566 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 LRRC71Q8N4P6 559 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 MRPL43Q8N983 215 aaKnown RBP5.78□□□□□ -1.48
PTCD3-219ENST00000494323 KYQ8NBH2 561 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 AUTS2Q8WXX7 1259 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 FAXDC2Q96IV6 333 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 CLIC6Q96NY7 704 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 GORASP1Q9BQQ3 440 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 ZNF577Q9BSK1 485 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 TMEM117Q9H0C3 514 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 POMKQ9H5K3 350 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 SLC39A2Q9NP94 309 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 LUC7LQ9NQ29 371 aaKnown RBP5.78□□□□□ -1.48
PTCD3-219ENST00000494323 GALNT8Q9NY28 637 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 SPG21Q9NZD8 308 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 ARHGAP20Q9P2F6 1191 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 NAP1L2Q9ULW6 460 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-219ENST00000494323 LUC7L2Q9Y383 392 aaKnown RBP5.78□□□□□ -1.48
PTCD3-219ENST00000494323 WDR87Q6ZQQ6 2873 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 IGLV3-22A0A075B6J6 115 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 PI15O43692 258 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 CYP7B1O75881 506 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 MPIG6BO95866 241 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 INHBBP09529 407 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 SRGAP2BP0DMP2 458 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 HOXB8P17481 243 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-219ENST00000494323 PI3P19957 117 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 MC4RP32245 332 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 SREBF1P36956 1147 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 LIMS1P48059 325 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 ALDH7A1P49419 539 aaKnown RBP5.77□□□□□ -1.49
PTCD3-219ENST00000494323 METAP2P50579 478 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTCD3-219ENST00000494323 ALDH6A1Q02252 535 aaKnown RBP5.77□□□□□ -1.49
PTCD3-219ENST00000494323 SSPNQ14714 243 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 PRR16Q569H4 304 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 CLLU1OSQ5K130 101 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 ATAT1Q5SQI0 421 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 RARS2Q5T160 578 aaKnown RBP5.77□□□□□ -1.49
PTCD3-219ENST00000494323 CES5AQ6NT32 575 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 ESPNLQ6ZVH7 1005 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 TTLL10Q6ZVT0 673 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 ASCL5Q7RTU5 278 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 SGMS1Q86VZ5 419 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 ECHDC2Q86YB7 292 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 VPS52Q8N1B4 723 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 CPA6Q8N4T0 437 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 LINC00482Q8N8I6 264 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 TMEM105Q8N8V8 129 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 WDR48Q8TAF3 677 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 GJA10Q969M2 543 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 ZNF558Q96NG5 402 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 SH2D3AQ9BRG2 576 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 KRTAP4-5Q9BYR2 181 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 ADAM7Q9H2U9 754 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 SEMA4AQ9H3S1 761 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 ELAC1Q9H777 363 aaKnown RBP5.77□□□□□ -1.49
PTCD3-219ENST00000494323 TBC1D22BQ9NU19 505 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 CCM2LQ9NUG4 571 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-219ENST00000494323 UCKL1Q9NWZ5 548 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 BARHL2Q9NY43 387 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 IP6K2Q9UHH9 426 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 KCNG1Q9UIX4 513 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 WASF3Q9UPY6 502 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 LZTS1Q9Y250 596 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 NR2E1Q9Y466 385 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 PCDHA10Q9Y5I2 948 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 KMT2EQ8IZD2 1858 aa5.77□□□□□ -1.49
PTCD3-219ENST00000494323 WDR81Q562E7 1941 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 A0A0U1RQF3 1178 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 MAGEB2O15479 319 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 ZBTB43O43298 467 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 ZRANB2O95218 330 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTCD3-219ENST00000494323 PRLP01236 227 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 CYP3A4P08684 503 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 MYBP10242 640 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 CPA1P15085 419 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 EPCAMP16422 314 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 TMOD1P28289 359 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 THBS2P35442 1172 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 BCAR1P56945 870 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 SCAND1P57086 179 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 SLC6A3Q01959 620 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 ITIH3Q06033 890 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 ADAM9Q13443 819 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 DRP2Q13474 957 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 SMC1AQ14683 1233 aaKnown RBP5.76□□□□□ -1.49
PTCD3-219ENST00000494323 MLC1Q15049 377 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 ADCK5Q3MIX3 580 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 CXorf57Q6NSI4 855 aaKnown RBP5.76□□□□□ -1.49
PTCD3-219ENST00000494323 LILRA6Q6PI73 481 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 APOA5Q6Q788 366 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 NIPA1Q7RTP0 329 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 FRMD5Q7Z6J6 570 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 SKAP1Q86WV1 359 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 TMEM173Q86WV6 379 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-219ENST00000494323 UBALD2Q8IYN6 164 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 SLC39A11Q8N1S5 342 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 CRYGNQ8WXF5 182 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms