RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 KXD1Q9BQD3 176 aa15.19■□□□□ 0.02
BRCA1-223ENST00000494123 NUP85Q9BW27 656 aa15.19■□□□□ 0.02
BRCA1-223ENST00000494123 COX16Q9P0S2 106 aa15.19■□□□□ 0.02
BRCA1-223ENST00000494123 CTTNBP2NLQ9P2B4 639 aa15.19■□□□□ 0.02
BRCA1-223ENST00000494123 LIMD1Q9UGP4 676 aa15.19■□□□□ 0.02
BRCA1-223ENST00000494123 INTUQ9ULD6 942 aa15.19■□□□□ 0.02
BRCA1-223ENST00000494123 PCDHA13Q9Y5I0 950 aa15.19■□□□□ 0.02
BRCA1-223ENST00000494123 LOC730098B7Z3J9 87 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 M0QYT0 321 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 LEFTY2O00292 366 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 MSI1O43347 362 aaKnown RBP15.18■□□□□ 0.02
BRCA1-223ENST00000494123 CYP1A2P05177 515 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 BMP1P13497 986 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 FCARP24071 287 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 RPL7AP62424 266 aaKnown RBP15.18■□□□□ 0.02
BRCA1-223ENST00000494123 ZP2Q05996 745 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 NME3Q13232 169 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 HTR4Q13639 388 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 SLC25A52Q3SY17 297 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 PPP1R15BQ5SWA1 713 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 TANGO2Q6ICL3 276 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 TXLNBQ8N3L3 684 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 ACRBPQ8NEB7 543 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 ELSPBP1Q96BH3 223 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 ARHGEF26Q96DR7 871 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 CFAP57Q96MR6 1250 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 DDX23Q9BUQ8 820 aaKnown RBP15.18■□□□□ 0.02
BRCA1-223ENST00000494123 KLF16Q9BXK1 252 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-223ENST00000494123 GKN1Q9NS71 199 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 DDIT4Q9NX09 232 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 OBP2AQ9NY56 170 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 CFAP97Q9P2B7 532 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 LSM7Q9UK45 103 aaKnown RBP15.18■□□□□ 0.02
BRCA1-223ENST00000494123 SH3BP1Q9Y3L3 701 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 HBS1LQ9Y450 684 aaKnown RBP15.18■□□□□ 0.02
BRCA1-223ENST00000494123 NUMBLQ9Y6R0 609 aa15.18■□□□□ 0.02
BRCA1-223ENST00000494123 TCF20Q9UGU0 1960 aaKnown RBP15.18■□□□□ 0.02
BRCA1-223ENST00000494123 C2CD4BA6NLJ0 364 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 HEPACAM2A8MVW5 462 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 ANHXE9PGG2 379 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 ECI2O75521 394 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 TBX4P57082 545 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 CCZ1BP86790 482 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 CCZ1P86791 482 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-223ENST00000494123 ATP11AP98196 1134 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 TRIP4Q15650 581 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-223ENST00000494123 TRNP1Q6NT89 227 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 CC2D1AQ6P1N0 951 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-223ENST00000494123 SND1Q7KZF4 910 aaKnown RBP eCLIP15.17■□□□□ 0.02
BRCA1-223ENST00000494123 KIAA1328Q86T90 577 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 YAF2Q8IY57 180 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 BPIFB1Q8TDL5 484 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 RNF34Q969K3 372 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 NXPE3Q969Y0 559 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 PLD4Q96BZ4 506 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 ZFRQ96KR1 1074 aaKnown RBP15.17■□□□□ 0.02
BRCA1-223ENST00000494123 NPY6RQ99463 290 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 DESI2Q9BSY9 194 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 IGSF9Q9P2J2 1179 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 UVRAGQ9P2Y5 699 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 TMEM191CA6NGB0 347 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 IRAK2O43187 625 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 F9P00740 461 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 PTPN9P43378 593 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 ZNF143P52747 638 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-223ENST00000494123 PITX1P78337 314 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-223ENST00000494123 DEUP1Q05D60 604 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 USP4Q13107 963 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 NNTQ13423 1086 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 ZNF77Q15935 545 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 CDO1Q16878 200 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 TJAP1Q5JTD0 557 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 RHOT2Q8IXI1 618 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 ZNF564Q8TBZ8 553 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-223ENST00000494123 PPP1R9BQ96SB3 815 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 TBCBQ99426 244 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 KCNK12Q9HB15 430 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 THG1LQ9NWX6 298 aaKnown RBP15.17■□□□□ 0.02
BRCA1-223ENST00000494123 TLR6Q9Y2C9 796 aa15.17■□□□□ 0.02
BRCA1-223ENST00000494123 STC2O76061 302 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 TCF3P15923 654 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 PSMC3P17980 439 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 PSMA2P25787 234 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 HARS2P49590 506 aaKnown RBP15.16■□□□□ 0.02
BRCA1-223ENST00000494123 VAV2P52735 878 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 ZXDBP98169 803 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 RING1Q06587 406 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 C15orf59Q2T9L4 293 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-223ENST00000494123 CCDC14Q49A88 953 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 NUGGCQ68CJ6 796 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 VITQ6UXI7 678 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 MFSD6LQ8IWD5 586 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 DEPDC1BQ8WUY9 529 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 RSAD2Q8WXG1 361 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 RFFLQ8WZ73 363 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 NT5C3BQ969T7 300 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 RSPRY1Q96DX4 576 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 CNPY3Q9BT09 278 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 DCLK3Q9C098 648 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 ANAPC7Q9UJX3 599 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms