RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 RPP40O75818 363 aaKnown RBP13.21□□□□□ -0.29
HSPG2-212ENST00000493940 GNA14O95837 355 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 RALAP11233 206 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.29
HSPG2-212ENST00000493940 CORO1AP31146 461 aaKnown RBP13.21□□□□□ -0.29
HSPG2-212ENST00000493940 CNR2P34972 360 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 GPD2P43304 727 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 TNFRSF4P43489 277 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 PSEN1P49768 467 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 YWHAEP62258 255 aaKnown RBP13.21□□□□□ -0.29
HSPG2-212ENST00000493940 MRPS21P82921 87 aaKnown RBP13.21□□□□□ -0.29
HSPG2-212ENST00000493940 ARHGAP8P85298 464 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 MIIPQ5JXC2 388 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 FYB2Q5VWT5 728 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 EGFLAMQ63HQ2 1017 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 LAIR1Q6GTX8 287 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 RASSF3Q86WH2 238 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 DENND1CQ8IV53 801 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 TERB1Q8NA31 727 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 MDGA1Q8NFP4 955 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 DUSP15Q9H1R2 295 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-212ENST00000493940 CD248Q9HCU0 757 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 RXFP3Q9NSD7 469 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 DEC1Q9P2X7 70 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 HESX1Q9UBX0 185 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 EBF1Q9UH73 591 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 KIAA1257Q9ULG3 409 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 ASCC3Q8N3C0 2202 aaKnown RBP13.2□□□□□ -0.3
HSPG2-212ENST00000493940 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-212ENST00000493940 TBC1D3BA6NDS4 549 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 M0QYV0 167 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 GFRA2O00451 464 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 MSI1O43347 362 aaKnown RBP13.2□□□□□ -0.3
HSPG2-212ENST00000493940 APBB3O95704 486 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 RETP07949 1114 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 PNMA6AP0CW24 399 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-212ENST00000493940 CCDC192P0DO97 292 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 BCKDHBP21953 392 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 PON1P27169 355 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 RPL34P49207 117 aaKnown RBP13.2□□□□□ -0.3
HSPG2-212ENST00000493940 DGKEP52429 567 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 ATXN1P54253 815 aaKnown RBP13.2□□□□□ -0.3
HSPG2-212ENST00000493940 LMNB2Q03252 620 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 TRIP4Q15650 581 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-212ENST00000493940 ARHGAP44Q17R89 818 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 PLK5Q496M5 336 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 KIAA1211LQ6NV74 962 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 CEP68Q76N32 757 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 FMNL3Q8IVF7 1028 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 SCML4Q8N228 414 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 WDTC1Q8N5D0 677 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 MLKLQ8NB16 471 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 RLN3Q8WXF3 142 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 MYEOVQ96EZ4 313 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 CNTNAP3BQ96NU0 1288 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 CNTNAP3Q9BZ76 1288 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 ARRDC1-AS1Q9H2J1 176 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 LRRC4Q9HBW1 653 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 SAMSN1Q9NSI8 373 aaKnown RBP13.2□□□□□ -0.3
HSPG2-212ENST00000493940 DNAJC17Q9NVM6 304 aaKnown RBP13.2□□□□□ -0.3
HSPG2-212ENST00000493940 DOCK9Q9BZ29 2069 aa13.2□□□□□ -0.3
HSPG2-212ENST00000493940 GOLGA6L7A0A1B0GV03 622 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 A0A1W2PQF6 199 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 TSPAN3O60637 253 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 PENKP01210 267 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-212ENST00000493940 SETSIPP0DME0 302 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 SGSHP51688 502 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 COG7P83436 770 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 SF3A2Q15428 464 aaKnown RBP13.19□□□□□ -0.3
HSPG2-212ENST00000493940 GEN1Q17RS7 908 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 C10orf76Q5T2E6 689 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 BTBD8Q5XKL5 378 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 TMEM215Q68D42 235 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 ANO7Q6IWH7 933 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 SCUBE3Q8IX30 993 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 FAM217AQ8IXS0 508 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 ACDQ96AP0 544 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 PIWIL1Q96J94 861 aaKnown RBP13.19□□□□□ -0.3
HSPG2-212ENST00000493940 ZC3H10Q96K80 434 aaKnown RBP13.19□□□□□ -0.3
HSPG2-212ENST00000493940 MIS12Q9H081 205 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 SLC6A17Q9H1V8 727 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 CD93Q9NPY3 652 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 SEMA4GQ9NTN9 838 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 MBD1Q9UIS9 605 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-212ENST00000493940 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
HSPG2-212ENST00000493940 STARD13Q9Y3M8 1113 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 NYNRINQ9P2P1 1898 aaKnown RBP13.19□□□□□ -0.3
HSPG2-212ENST00000493940 ZFHX4Q86UP3 3567 aa13.19□□□□□ -0.3
HSPG2-212ENST00000493940 LETM1O95202 739 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-212ENST00000493940 KRT5P13647 590 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 CLCN1P35523 988 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 PITX1P78337 314 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-212ENST00000493940 TAF5Q15542 800 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 SYPL2Q5VXT5 272 aa13.18□□□□□ -0.3
HSPG2-212ENST00000493940 GRAMD4Q6IC98 578 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms