RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 PLXND1Q9Y4D7 1925 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 HMBSP08397 361 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 CORO1AP31146 461 aaKnown RBP24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 WASP42768 502 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 PDE4CQ08493 712 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 LRMPQ12912 555 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 TOGARAM2Q6ZUX3 1019 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 ULBP1Q9BZM6 244 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 LRRC4Q9HBW1 653 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 PLK2Q9NYY3 685 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 HCN2Q9UL51 889 aa24.83■■□□□ 1.57
RHBDD3-206ENST00000493894 ABCA7Q8IZY2 2146 aa24.82■■□□□ 1.56
RHBDD3-206ENST00000493894 ZBTB24O43167 697 aaPredicted RBP24.82■■□□□ 1.56
RHBDD3-206ENST00000493894 KLKB1P03952 638 aa24.82■■□□□ 1.56
RHBDD3-206ENST00000493894 MAP7D1Q3KQU3 841 aa24.82■■□□□ 1.56
RHBDD3-206ENST00000493894 KLHL10Q6JEL2 608 aa24.82■■□□□ 1.56
RHBDD3-206ENST00000493894 UBR7Q8N806 425 aa24.82■■□□□ 1.56
RHBDD3-206ENST00000493894 MYO18AQ92614 2054 aaKnown RBP24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 SLC12A8A0AV02 714 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 LNP1A1A4G5 178 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 PRRT4C9JH25 899 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 KHNYNO15037 678 aaKnown RBP24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 PENKP01210 267 aaPredicted RBP24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 SETSIPP0DME0 302 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 VDRP11473 427 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 CD44P16070 742 aaKnown RBP24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 GABRG2P18507 467 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 ADIGQ0VDE8 80 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 PM20D1Q6GTS8 502 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 SIX6OS1Q8N1H7 587 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 PIGKQ92643 395 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 PLD4Q96BZ4 506 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 NT5C1BQ96P26 610 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 IPO9Q96P70 1041 aaKnown RBP24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 ACOX2Q99424 681 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 OLA1Q9NTK5 396 aaKnown RBP24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 CALCOCO1Q9P1Z2 691 aa24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 AGO1Q9UL18 857 aaKnown RBP24.81■■□□□ 1.56
RHBDD3-206ENST00000493894 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 A0A1W2PQF6 199 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 BICDL2A1A5D9 508 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 TULP2O00295 520 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 O00370 1275 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 TM4SF5O14894 197 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 PMM2O15305 246 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 CISD3P0C7P0 127 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 CETN1Q12798 172 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 SPDYCQ5MJ68 293 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 FYB2Q5VWT5 728 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 TMEM270Q6UE05 265 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 ARMCX6Q7L4S7 300 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 DENND1CQ8IV53 801 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 TMEFF1Q8IYR6 380 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 FRMD1Q8N878 549 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 GABRG3Q99928 467 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 MBD1Q9UIS9 605 aaPredicted RBP24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 FBXO10Q9UK96 956 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 KIAA1257Q9ULG3 409 aa24.8■■□□□ 1.56
RHBDD3-206ENST00000493894 CYBBP04839 570 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 PAEPP09466 180 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 DPP6P42658 865 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 TTI2Q6NXR4 508 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 FOXR2Q6PJQ5 311 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 BHLHA9Q7RTU4 235 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 PPM1KQ8N3J5 372 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 IPO4Q8TEX9 1081 aaKnown RBP24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 NELFBQ8WX92 580 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 CTNND2Q9UQB3 1225 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 SLC27A6Q9Y2P4 619 aa24.79■■□□□ 1.56
RHBDD3-206ENST00000493894 PATE3B3GLJ2 98 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 GFRA2O00451 464 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 AP5Z1O43299 807 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 PTGER3P43115 390 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 LYSMD4Q5XG99 296 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 CPXM2Q8N436 756 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 UBA3Q8TBC4 463 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 RNF139Q8WU17 664 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 KCTD13Q8WZ19 329 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 P2RY11Q96G91 374 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 LSM14BQ9BX40 385 aaKnown RBP24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 CACNA2D2Q9NY47 1150 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 PCDHB4Q9Y5E5 795 aa24.78■■□□□ 1.56
RHBDD3-206ENST00000493894 TNRC6BQ9UPQ9 1833 aaKnown RBP24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 LAMA1P25391 3075 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 P4HA2O15460 535 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 ZNF217O75362 1048 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 NDUFV2P19404 249 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 MFAP3P55082 362 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 RPL6Q02878 288 aaKnown RBP24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 KIAA1211LQ6NV74 962 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 SLC36A4Q6YBV0 504 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 SYT12Q8IV01 421 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 NDRG1Q92597 394 aaKnown RBP24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 CD248Q9HCU0 757 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 TMEM9BQ9NQ34 198 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 CNGB3Q9NQW8 809 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 EVLQ9UI08 416 aaPredicted RBP24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 RAD54BQ9Y620 910 aa24.77■■□□□ 1.56
RHBDD3-206ENST00000493894 C4orf47A7E2U8 309 aa24.76■■□□□ 1.55
RHBDD3-206ENST00000493894 PPP1R3GB7ZBB8 358 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms