RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 DNAJC5GQ8N7S2 189 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 PLBD2Q8NHP8 589 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 C16orf52Q8NHV5 167 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 CUL5Q93034 780 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 COQ8BQ96D53 544 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 ZC3H10Q96K80 434 aaKnown RBP3.93□□□□□ -1.78
PTCD3-218ENST00000493430 MRGPRX1Q96LB2 322 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 PCGF6Q9BYE7 350 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 EBF3Q9H4W6 596 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 PRDM11Q9NQV5 511 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 ZSCAN32Q9NX65 697 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 TRPC5Q9UL62 973 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-218ENST00000493430 ANKRD6Q9Y2G4 727 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 MEGF6O75095 1541 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 ABCC6O95255 1503 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 USP19O94966 1318 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 A0A088AWK7 358 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 GCATO75600 419 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 VNN1O95497 513 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 FGAP02671 866 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 PHKG2P15735 406 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 CCKBRP32239 447 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 GHRHRQ02643 423 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 TWIST1Q15672 202 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 GPR162Q16538 588 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 KLHL22Q53GT1 634 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 GAS2L3Q86XJ1 694 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 SLC15A4Q8N697 577 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 NRACQ8N912 160 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 NSMCE1Q8WV22 266 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 WASF1Q92558 559 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 PPP2R3CQ969Q6 453 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 PRR25Q96S07 402 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 P2RX7Q99572 595 aaKnown RBP3.92□□□□□ -1.78
PTCD3-218ENST00000493430 C17orf80Q9BSJ5 609 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 EFHD1Q9BUP0 239 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 PCDH12Q9NPG4 1184 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 HOMER2Q9NSB8 354 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 PI4KBQ9UBF8 816 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 COL4A3BPQ9Y5P4 624 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 SNX14Q9Y5W7 946 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 SPEF2Q9C093 1822 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 OVOS2A0A0J9YW53 1432 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 OVOS2Q6IE36 1432 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 TAF1P21675 1872 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 SPATA31A5Q5VU36 1347 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 SPATA31A7Q8IWB4 1347 aa3.92□□□□□ -1.78
PTCD3-218ENST00000493430 KTN1Q86UP2 1357 aaKnown RBP3.91□□□□□ -1.78
PTCD3-218ENST00000493430 USP47Q96K76 1375 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 DISP2A7MBM2 1401 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 CES2O00748 559 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 OFD1O75665 1012 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 PF4V1P10720 104 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 BLMP54132 1417 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-218ENST00000493430 SUMO2P61956 95 aaKnown RBP3.91□□□□□ -1.78
PTCD3-218ENST00000493430 RAB1AP62820 205 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 MLC1Q15049 377 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 RBMS2Q15434 407 aaKnown RBP3.91□□□□□ -1.78
PTCD3-218ENST00000493430 PLA1AQ53H76 456 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 BRDTQ58F21 947 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-218ENST00000493430 TMEM63BQ5T3F8 832 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 C10orf25Q5T742 122 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 RUSC1-AS1Q66K80 236 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 ZNF783Q6ZMS7 281 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 DPY19L3Q6ZPD9 716 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 IRF2BP2Q7Z5L9 587 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 RAB11FIP4Q86YS3 637 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 ANKRD31Q8N7Z5 1873 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 ZNF398Q8TD17 642 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 KBTBD7Q8WVZ9 684 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 LTV1Q96GA3 475 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-218ENST00000493430 MMS19Q96T76 1030 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 POLR3GLQ9BT43 218 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 SLC12A5Q9H2X9 1139 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 ASIC5Q9NY37 505 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 STAP2Q9UGK3 403 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 IP6K2Q9UHH9 426 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 UBR2Q8IWV8 1755 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 SPATA31A1Q5TZJ5 1347 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 TTC21BQ7Z4L5 1316 aa3.91□□□□□ -1.78
PTCD3-218ENST00000493430 EIF3AQ14152 1382 aaKnown RBP3.9□□□□□ -1.78
PTCD3-218ENST00000493430 SBF1O95248 1867 aa3.9□□□□□ -1.78
PTCD3-218ENST00000493430 CRB1P82279 1406 aa3.9□□□□□ -1.78
PTCD3-218ENST00000493430 TNS2Q63HR2 1409 aa3.9□□□□□ -1.78
PTCD3-218ENST00000493430 A0A087WWL8 130 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 BTN3A1O00481 513 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 PMPCBO75439 489 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 RNF8O76064 485 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 MT-CO3P00414 261 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 PRF1P14222 555 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 SCP2P22307 547 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 GKP32189 559 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 CCKARP32238 428 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 PSG6Q00889 435 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 CTBP1Q13363 440 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 CCNIQ14094 377 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 CERCAMQ5T4B2 595 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 IFIT1BQ5T764 474 aaKnown RBP3.9□□□□□ -1.79
PTCD3-218ENST00000493430 DENND2CQ68D51 928 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 SMIM5Q71RC9 77 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms