RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SUSD2Q9UGT4 822 aa14.43□□□□□ -0.1
SAMM50-204ENST00000493161 LSM7Q9UK45 103 aaKnown RBP14.43□□□□□ -0.1
SAMM50-204ENST00000493161 PCDHB9Q9Y5E1 797 aa14.43□□□□□ -0.1
SAMM50-204ENST00000493161 LOC400499M0QZD8 3231 aa14.43□□□□□ -0.1
SAMM50-204ENST00000493161 LAMA5O15230 3695 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 GFRA2O00451 464 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 CUTAO60888 179 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 FAM200BP0CF97 657 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 NCAM1P13591 858 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 GNSP15586 552 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 AP3M2P53677 418 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 SGSM1Q2NKQ1 1148 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 COL28A1Q2UY09 1125 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 ZACNQ401N2 412 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 WDR45BQ5MNZ6 344 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 C10orf120Q5SQS8 335 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 C1orf220Q5T0J3 134 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 FYB2Q5VWT5 728 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 CACUL1Q86Y37 369 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 DNASE2BQ8WZ79 361 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 HNRNPABQ99729 332 aaKnown RBP14.42□□□□□ -0.1
SAMM50-204ENST00000493161 MIR1-1HGQ9H1L0 117 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 ITM2CQ9NQX7 267 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 CGNQ9P2M7 1197 aaKnown RBP14.42□□□□□ -0.1
SAMM50-204ENST00000493161 DNMT3LQ9UJW3 386 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 PCOLCE2Q9UKZ9 415 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 CLEC4EQ9ULY5 219 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 SLCO1B1Q9Y6L6 691 aa14.42□□□□□ -0.1
SAMM50-204ENST00000493161 CELSR3Q9NYQ7 3312 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 A0A1B0GTW7 788 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 MEI4A8MW99 385 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 KLRC4O43908 158 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 ASS1P00966 412 aaKnown RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 PENKP01210 267 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 HMBSP08397 361 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 PLA2G4AP47712 749 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 TPMTP51580 245 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 MFAP3P55082 362 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 GOLGA8FQ08AF8 430 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 GOLGA8DPQ0D2H9 430 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 STK4Q13043 487 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 ENPP2Q13822 863 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 FOXD4L6Q3SYB3 417 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 SOWAHCQ53LP3 525 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 DCAF12L1Q5VU92 463 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 FOXD4L5Q5VV16 416 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 FOXD4L3Q6VB84 417 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 SV2AQ7L0J3 742 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 METTL3Q86U44 580 aaKnown RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 PDZD3Q86UT5 571 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 UNC93AQ86WB7 457 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 KIAA0895Q8NCT3 520 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 FOXD4L4Q8WXT5 416 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 SORCS1Q8WY21 1168 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 CYFIP2Q96F07 1278 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 GAREM1Q9H706 876 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 APOBEC3GQ9HC16 384 aaKnown RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 THAP10Q9P2Z0 257 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 NAGPAQ9UK23 515 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 FNDC3AQ9Y2H6 1198 aaKnown RBP14.41□□□□□ -0.1
SAMM50-204ENST00000493161 SLC27A6Q9Y2P4 619 aa14.41□□□□□ -0.1
SAMM50-204ENST00000493161 ANKRD11Q6UB99 2663 aaPredicted RBP14.4□□□□□ -0.1
SAMM50-204ENST00000493161 MYH10P35580 1976 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 FASNP49327 2511 aaKnown RBP14.4□□□□□ -0.1
SAMM50-204ENST00000493161 PVALEFA0A1B0GWK0 134 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 HLA-DRAP01903 254 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 PRKCHP24723 683 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 KIF11P52732 1056 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 COPAP53621 1224 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 KLHDC10Q6PID8 442 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 TMPRSS6Q8IU80 811 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 RBBP8NLQ8NC74 664 aaPredicted RBP14.4□□□□□ -0.1
SAMM50-204ENST00000493161 SETD7Q8WTS6 366 aaKnown RBP14.4□□□□□ -0.1
SAMM50-204ENST00000493161 INTS4Q96HW7 963 aaKnown RBP14.4□□□□□ -0.1
SAMM50-204ENST00000493161 PIWIL1Q96J94 861 aaKnown RBP14.4□□□□□ -0.1
SAMM50-204ENST00000493161 CCDC86Q9H6F5 360 aaKnown RBP14.4□□□□□ -0.1
SAMM50-204ENST00000493161 TOR4AQ9NXH8 423 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 EIF2B4Q9UI10 523 aaKnown RBP14.4□□□□□ -0.1
SAMM50-204ENST00000493161 RAXQ9Y2V3 346 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 PCDHA5Q9Y5H7 936 aa14.4□□□□□ -0.1
SAMM50-204ENST00000493161 METTL12A8MUP2 240 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 BCAT2O15382 392 aaPredicted RBP14.39□□□□□ -0.11
SAMM50-204ENST00000493161 CILPO75339 1184 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 KIF20AO95235 890 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 YEATS4O95619 227 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 RPN1P04843 607 aaKnown RBP14.39□□□□□ -0.11
SAMM50-204ENST00000493161 ATXN1LP0C7T5 689 aaKnown RBP14.39□□□□□ -0.11
SAMM50-204ENST00000493161 P4HA1P13674 534 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 CORO1AP31146 461 aaKnown RBP14.39□□□□□ -0.11
SAMM50-204ENST00000493161 PIK3CAP42336 1068 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 INCA1Q0VD86 236 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 ZNF234Q14588 700 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 STARD3Q14849 445 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 HLA-BQ31612 363 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 TMEM215Q68D42 235 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 GLRX5Q86SX6 157 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 FAM124AQ86V42 546 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 SLC9A9Q8IVB4 645 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 CADM4Q8NFZ8 388 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 C1orf216Q8TAB5 229 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms