RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SLC4A11Q8NBS3 891 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 SPATA20Q8TB22 786 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 HMGB4Q8WW32 186 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 PLD4Q96BZ4 506 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 DHTKD1Q96HY7 919 aaPredicted RBP9.19□□□□□ -0.94
NUP50-217ENST00000491860 SLC2A11Q9BYW1 496 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 POLR3BQ9NW08 1133 aaPredicted RBP9.19□□□□□ -0.94
NUP50-217ENST00000491860 RALYQ9UKM9 306 aaKnown RBP9.19□□□□□ -0.94
NUP50-217ENST00000491860 SLC27A6Q9Y2P4 619 aa9.19□□□□□ -0.94
NUP50-217ENST00000491860 BICDL2A1A5D9 508 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 TMEM8BA6NDV4 472 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 XPO1O14980 1071 aaKnown RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 P4HA2O15460 535 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 TIMM44O43615 452 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 GREM1O60565 184 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 ADAM23O75077 832 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 STC2O76061 302 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 LATS1O95835 1130 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 VDRP11473 427 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 CSRP1P21291 193 aaKnown RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 HARS2P49590 506 aaKnown RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 RAD23BP54727 409 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 YWHAGP61981 247 aaKnown RBP eCLIP9.18□□□□□ -0.94
NUP50-217ENST00000491860 BST2Q10589 180 aaKnown RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 PNOCQ13519 176 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 CUL2Q13617 745 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 ACAP1Q15027 740 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 CCDC6Q16204 474 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 PEAR1Q5VY43 1037 aaPredicted RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 LYSMD4Q5XG99 296 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 SMYD5Q6GMV2 418 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 PM20D1Q6GTS8 502 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 UNQ6494/PRO21346Q6UXR6 183 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 TPGS1Q6ZTW0 290 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 METTL3Q86U44 580 aaKnown RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 PIGZQ86VD9 579 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 RNF139Q8WU17 664 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 PIGKQ92643 395 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 GOLGA1Q92805 767 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 SEMA4DQ92854 862 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 JAKMIP2Q96AA8 810 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 IPO9Q96P70 1041 aaKnown RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 GABRG3Q99928 467 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 NMUR1Q9HB89 426 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 LRRC4Q9HBW1 653 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 OSER1Q9NX31 292 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 MARCH2Q9P0N8 246 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 SUSD2Q9UGT4 822 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 RASAL2Q9UJF2 1139 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 FBXO10Q9UK96 956 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 CIZ1Q9ULV3 898 aaPredicted RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 WASF3Q9UPY6 502 aa9.18□□□□□ -0.94
NUP50-217ENST00000491860 HBS1LQ9Y450 684 aaKnown RBP9.18□□□□□ -0.94
NUP50-217ENST00000491860 CEP192Q8TEP8 1941 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 LNP1A1A4G5 178 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 NDUFS2O75306 463 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 FGFR1OPO95684 399 aaKnown RBP9.17□□□□□ -0.94
NUP50-217ENST00000491860 GNA14O95837 355 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 TBX18O95935 607 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 ZBED1O96006 694 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 PENKP01210 267 aaPredicted RBP9.17□□□□□ -0.94
NUP50-217ENST00000491860 PAEPP09466 180 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 CHRM1P11229 460 aaPredicted RBP9.17□□□□□ -0.94
NUP50-217ENST00000491860 CEACAM1P13688 526 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 GABRG2P18507 467 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 KCNA4P22459 653 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 HOXC13P31276 330 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 ATXN3P54252 364 aaPredicted RBP9.17□□□□□ -0.94
NUP50-217ENST00000491860 RPL6Q02878 288 aaKnown RBP9.17□□□□□ -0.94
NUP50-217ENST00000491860 PDE4CQ08493 712 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 EFEMP1Q12805 493 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 HNRNPDQ14103 355 aaKnown RBP9.17□□□□□ -0.94
NUP50-217ENST00000491860 DUOXA1Q1HG43 343 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 MAP7D1Q3KQU3 841 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 MPPE1Q53F39 396 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 SYCP2LQ5T4T6 812 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 EMC10Q5UCC4 262 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 ANKRD40Q6AI12 368 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 SLC23A3Q6PIS1 610 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 ANKS1BQ7Z6G8 1248 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 SCD5Q86SK9 330 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 MIB1Q86YT6 1006 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 SIX6OS1Q8N1H7 587 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 ENGASEQ8NFI3 743 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 IPO4Q8TEX9 1081 aaKnown RBP9.17□□□□□ -0.94
NUP50-217ENST00000491860 KCTD13Q8WZ19 329 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 FOXJ1Q92949 421 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 ELMO3Q96BJ8 720 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 FAM81BQ96LP2 452 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 NT5C1BQ96P26 610 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 TRIM62Q9BVG3 475 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
NUP50-217ENST00000491860 SLC32A1Q9H598 525 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 GDPD2Q9HCC8 539 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 CNGB3Q9NQW8 809 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 RXFP3Q9NSD7 469 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 ABCC13Q9NSE7 274 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 TSPAN16Q9UKR8 245 aa9.17□□□□□ -0.94
NUP50-217ENST00000491860 ZMIZ1Q9ULJ6 1067 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms