RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 EDEM1Q92611 657 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 ELSPBP1Q96BH3 223 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 PLD4Q96BZ4 506 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 TCEAL4Q96EI5 215 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 ASB16Q96NS5 453 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 LRRC3Q9BY71 257 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 ISCUQ9H1K1 167 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 METTL5Q9NRN9 209 aaKnown RBP8.66□□□□□ -1.02
RNF38-209ENST00000491349 TMEM30AQ9NV96 361 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 ARHGAP20Q9P2F6 1191 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 MYO1AQ9UBC5 1043 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 CNOT8Q9UFF9 292 aaKnown RBP8.66□□□□□ -1.02
RNF38-209ENST00000491349 ARHGAP26Q9UNA1 814 aa8.66□□□□□ -1.02
RNF38-209ENST00000491349 A0A087X0T9 212 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 SLC12A8A0AV02 714 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 C2orf78A6NCI8 922 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 SIGLEC16A6NMB1 481 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 EIF3CLB5ME19 914 aaKnown RBP8.65□□□□□ -1.02
RNF38-209ENST00000491349 C2CD4DB7Z1M9 353 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 DDX3XO00571 662 aaKnown RBP eCLIP8.65□□□□□ -1.02
RNF38-209ENST00000491349 ZNF263O14978 683 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 ARHGAP6O43182 974 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 COCHO43405 550 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 CYBBP04839 570 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 PLEKP08567 350 aaPredicted RBP8.65□□□□□ -1.02
RNF38-209ENST00000491349 ZDHHC11BP0C7U3 371 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 FAM228BP0C875 321 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 IRF1P10914 325 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 IL9P15248 144 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 PDGFRAP16234 1089 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 PSMC3P17980 439 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 GPD1P21695 349 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 CCR1P32246 355 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 CHKAP35790 457 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 CCR2P41597 374 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 SLC11A2P49281 568 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 SULT1E1P49888 294 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 KCNQ1P51787 676 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 TBX4P57082 545 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 DEUP1Q05D60 604 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 NNTQ13423 1086 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 ACAP1Q15027 740 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 PDGFRLQ15198 375 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 PREPLQ4J6C6 727 aaPredicted RBP8.65□□□□□ -1.02
RNF38-209ENST00000491349 ODF2Q5BJF6 829 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 WDR59Q6PJI9 974 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 OLFML1Q6UWY5 402 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 NUDT18Q6ZVK8 323 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 MON1BQ7L1V2 547 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 DEFB106AQ8N104 65 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 ATP6V0D2Q8N8Y2 350 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 IRF7Q92985 503 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 OTUB2Q96DC9 234 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 MYADMQ96S97 322 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 PCDHB18PQ96TA0 734 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 EIF3CQ99613 913 aaKnown RBP8.65□□□□□ -1.02
RNF38-209ENST00000491349 CHP1Q99653 195 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 TRMT61BQ9BVS5 477 aaKnown RBP8.65□□□□□ -1.02
RNF38-209ENST00000491349 SLC46A2Q9BY10 475 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 TSGA10Q9BZW7 698 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 SMOC2Q9H3U7 446 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 CCSER2Q9H7U1 834 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 BRD9Q9H8M2 597 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 TRPV4Q9HBA0 871 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 PRDM6Q9NQX0 595 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.65□□□□□ -1.02
RNF38-209ENST00000491349 CTTNBP2NLQ9P2B4 639 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 UVRAGQ9P2Y5 699 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 CYTH4Q9UIA0 394 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 CPQQ9Y646 472 aa8.65□□□□□ -1.02
RNF38-209ENST00000491349 EPN1Q9Y6I3 576 aaPredicted RBP8.65□□□□□ -1.02
RNF38-209ENST00000491349 SYNJ2BP-COX16A0A087WUM0 186 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 E2F8A0AVK6 867 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 HEPACAM2A8MVW5 462 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 M0QYT0 321 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 MYO1FO00160 1098 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 CCP110O43303 1012 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 GRAP2O75791 330 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 NDUFA10O95299 355 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 NFATC1O95644 943 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 TRUB2O95900 331 aaKnown RBP8.64□□□□□ -1.03
RNF38-209ENST00000491349 TMEM253P0C7T8 217 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 TCF3P15923 654 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 PSMA2P25787 234 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 RDXP35241 583 aaKnown RBP8.64□□□□□ -1.03
RNF38-209ENST00000491349 NOP2P46087 812 aaKnown RBP8.64□□□□□ -1.03
RNF38-209ENST00000491349 GALCP54803 685 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 RING1Q06587 406 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 KIF5AQ12840 1032 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 NME3Q13232 169 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 PIGHQ14442 188 aaPredicted RBP8.64□□□□□ -1.03
RNF38-209ENST00000491349 MTF1Q14872 753 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 TRIP4Q15650 581 aaPredicted RBP8.64□□□□□ -1.03
RNF38-209ENST00000491349 HADHQ16836 314 aaKnown RBP8.64□□□□□ -1.03
RNF38-209ENST00000491349 SLC25A52Q3SY17 297 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 FAM78AQ5JUQ0 283 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 E4F1Q66K89 784 aaPredicted RBP8.64□□□□□ -1.03
RNF38-209ENST00000491349 MSANTD2Q6P1R3 559 aa8.64□□□□□ -1.03
RNF38-209ENST00000491349 C1orf228Q6PIY5 440 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms