RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ST6GAL1P15907 406 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 YY1P25490 414 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 SUMO3P55854 103 aaPredicted RBP4.76□□□□□ -1.65
PHC3-213ENST00000491258 P2RX3P56373 397 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 WDR5P61964 334 aaKnown RBP4.76□□□□□ -1.65
PHC3-213ENST00000491258 FHL3Q13643 280 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 SLC29A2Q14542 456 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 ANO6Q4KMQ2 910 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 B3GNT9Q6UX72 402 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 ADGRF4Q8IZF3 695 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 JPH3Q8WXH2 748 aaPredicted RBP4.76□□□□□ -1.65
PHC3-213ENST00000491258 TRIM43Q96BQ3 446 aaPredicted RBP4.76□□□□□ -1.65
PHC3-213ENST00000491258 ZNF668Q96K58 619 aaPredicted RBP4.76□□□□□ -1.65
PHC3-213ENST00000491258 ARHGAP39Q9C0H5 1083 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 PCDH12Q9NPG4 1184 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 STK32BQ9NY57 414 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 CPNE7Q9UBL6 633 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 CADPSQ9ULU8 1353 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 USP19O94966 1318 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 SPATA31A1Q5TZJ5 1347 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 HOXB2P14652 356 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 TPH1P17752 444 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 TBXAS1P24557 533 aaPredicted RBP4.75□□□□□ -1.65
PHC3-213ENST00000491258 ACVR2AP27037 513 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 ARRB2P32121 409 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 CPT1AP50416 773 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 AGFG1P52594 562 aaKnown RBP4.75□□□□□ -1.65
PHC3-213ENST00000491258 ODF3L2Q3SX64 289 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 NPNTQ6UXI9 565 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 RBM44Q6ZP01 1051 aaKnown RBP4.75□□□□□ -1.65
PHC3-213ENST00000491258 ZBTB34Q8NCN2 500 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 ATP2A3Q93084 1043 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 FAM84BQ96KN1 310 aaPredicted RBP4.75□□□□□ -1.65
PHC3-213ENST00000491258 NTPCRQ9BSD7 190 aaKnown RBP4.75□□□□□ -1.65
PHC3-213ENST00000491258 B3GNT5Q9BYG0 378 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 DHX36Q9H2U1 1008 aaKnown RBP4.75□□□□□ -1.65
PHC3-213ENST00000491258 PAPOLBQ9NRJ5 636 aaKnown RBP4.75□□□□□ -1.65
PHC3-213ENST00000491258 VPS45Q9NRW7 570 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 PNMA8BQ9ULN7 279 aaPredicted RBP4.75□□□□□ -1.65
PHC3-213ENST00000491258 SLC27A6Q9Y2P4 619 aa4.75□□□□□ -1.65
PHC3-213ENST00000491258 BAZ1BQ9UIG0 1483 aaKnown RBP4.75□□□□□ -1.65
PHC3-213ENST00000491258 SMARCA2P51531 1590 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 TRBV5-3A0A0A0MS03 114 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 AQP7P3A6NL99 342 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 C16orf96A6NNT2 1141 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 TMIGD3P0DMS9 266 aaPredicted RBP4.74□□□□□ -1.65
PHC3-213ENST00000491258 TMEM225BP0DP42 221 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 BRAFP15056 766 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 ZKSCAN1P17029 563 aaPredicted RBP4.74□□□□□ -1.65
PHC3-213ENST00000491258 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 POLD2P49005 469 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 VPS41P49754 854 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 C3orf38Q5JPI3 329 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 NUGGCQ68CJ6 796 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 PDXDC1Q6P996 788 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 MAEAQ7L5Y9 396 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.74□□□□□ -1.65
PHC3-213ENST00000491258 NR2C2APQ86WQ0 139 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 NEUROG1Q92886 237 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 MIB2Q96AX9 1013 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 PRR11Q96HE9 360 aaPredicted RBP4.74□□□□□ -1.65
PHC3-213ENST00000491258 MED30Q96HR3 178 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 RBM38Q9H0Z9 239 aaKnown RBP4.74□□□□□ -1.65
PHC3-213ENST00000491258 MOV10Q9HCE1 1003 aaKnown RBP4.74□□□□□ -1.65
PHC3-213ENST00000491258 SEMA5BQ9P283 1151 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 MID2Q9UJV3 735 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 NESP48681 1621 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 TRIP12Q14669 1992 aaPredicted RBP4.74□□□□□ -1.65
PHC3-213ENST00000491258 MROH2BQ7Z745 1585 aa4.74□□□□□ -1.65
PHC3-213ENST00000491258 PDS5BQ9NTI5 1447 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 TFEBP19484 476 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 RBL1P28749 1068 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 RAE1P78406 368 aaKnown RBP4.73□□□□□ -1.65
PHC3-213ENST00000491258 NFATC4Q14934 902 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 CNGA3Q16281 694 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 GRHL2Q6ISB3 625 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 TRAPPC11Q7Z392 1133 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 UEVLDQ8IX04 471 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 FSTL5Q8N475 847 aaPredicted RBP4.73□□□□□ -1.65
PHC3-213ENST00000491258 SLC35G2Q8TBE7 412 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 NUDCD2Q8WVJ2 157 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 TAAR9Q96RI9 348 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 KRTAP4-4Q9BYR3 166 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 SAP30LQ9HAJ7 183 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 DNAJB11Q9UBS4 358 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 VPS4AQ9UN37 437 aa4.73□□□□□ -1.65
PHC3-213ENST00000491258 BAZ1AQ9NRL2 1556 aaPredicted RBP4.73□□□□□ -1.65
PHC3-213ENST00000491258 HMGXB3Q12766 1538 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 CAPN8A6NHC0 703 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 FAM227AF5H4B4 570 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 ACOT8O14734 319 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 TUSC2O75896 110 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 MBPP02686 304 aaPredicted RBP4.72□□□□□ -1.65
PHC3-213ENST00000491258 FGF3P11487 239 aaPredicted RBP4.72□□□□□ -1.65
PHC3-213ENST00000491258 HOXA11P31270 313 aaPredicted RBP4.72□□□□□ -1.65
PHC3-213ENST00000491258 IDUAP35475 653 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 KCNAB1Q14722 419 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 CLCA4Q14CN2 919 aa4.72□□□□□ -1.65
PHC3-213ENST00000491258 SPATA2LQ8IUW3 424 aaPredicted RBP4.72□□□□□ -1.65
PHC3-213ENST00000491258 YAF2Q8IY57 180 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms