RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 CLCN5P51795 746 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 MLLT6P55198 1093 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-207ENST00000491052 AMPD2Q01433 879 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 SLC6A3Q01959 620 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 PON2Q15165 354 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 DHCR24Q15392 516 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 CLEC16AQ2KHT3 1053 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 FAM102AQ5T9C2 384 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-207ENST00000491052 SYPL2Q5VXT5 272 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 C1orf228Q6PIY5 440 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 TXNDC11Q6PKC3 985 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 MMS22LQ6ZRQ5 1243 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 SLC26A9Q7LBE3 791 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 TAC4Q86UU9 113 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 DENND1CQ8IV53 801 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 TMEM105Q8N8V8 129 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 ADAM32Q8TC27 787 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 SERPINB11Q96P15 392 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 PCDHB18PQ96TA0 734 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 C11orf70Q9BRQ4 267 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 DCLK3Q9C098 648 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 RBSNQ9H1K0 784 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 FAM204AQ9H8W3 233 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 ASNSD1Q9NWL6 643 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 AIPL1Q9NZN9 384 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 SIT1Q9Y3P8 196 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.39□□□□□ -0.27
LIMK1-207ENST00000491052 DOCK4Q8N1I0 1966 aa13.39□□□□□ -0.27
LIMK1-207ENST00000491052 SHISA7A6NL88 538 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 FAM170BA6NMN3 283 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 PI15O43692 258 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 GREM1O60565 184 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 DAB1O75553 588 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 KLKB1P03952 638 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 GYPCP04921 128 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 DCNP07585 359 aaKnown RBP13.38□□□□□ -0.27
LIMK1-207ENST00000491052 ADH5P11766 374 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 TNFAIP3P21580 790 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 AVPR2P30518 371 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 GABRB2P47870 512 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 HARS2P49590 506 aaKnown RBP13.38□□□□□ -0.27
LIMK1-207ENST00000491052 TBX4P57082 545 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
LIMK1-207ENST00000491052 ZBED6P86452 979 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 TRIP4Q15650 581 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-207ENST00000491052 ANO4Q32M45 955 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 TDRD12Q587J7 1177 aaKnown RBP13.38□□□□□ -0.27
LIMK1-207ENST00000491052 DCAF6Q58WW2 860 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 LY6G5CQ5SRR4 150 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 SPECC1LQ69YQ0 1117 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 Q6ZNB5 142 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 BEND5Q7L4P6 421 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 XYLT1Q86Y38 959 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 CCDC105Q8IYK2 499 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 ADGRG2Q8IZP9 1017 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 DEFB106AQ8N104 65 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 NELL2Q99435 816 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 TRIM5Q9C035 493 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 NUCKS1Q9H1E3 243 aaKnown RBP13.38□□□□□ -0.27
LIMK1-207ENST00000491052 HAUS4Q9H6D7 363 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 CAPN11Q9UMQ6 739 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 ZNF510Q9Y2H8 683 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 LUC7L2Q9Y383 392 aaKnown RBP13.38□□□□□ -0.27
LIMK1-207ENST00000491052 MTF2Q9Y483 593 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-207ENST00000491052 MUC6Q6W4X9 2439 aa13.38□□□□□ -0.27
LIMK1-207ENST00000491052 SYNJ2BP-COX16A0A087WUM0 186 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 NCAM2O15394 837 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 TRUB2O95900 331 aaKnown RBP13.37□□□□□ -0.27
LIMK1-207ENST00000491052 SKILP12757 684 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 UNGP13051 313 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-207ENST00000491052 MMP8P22894 467 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 CASP14P31944 242 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 PITX1P78337 314 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-207ENST00000491052 CDK17Q00537 523 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 CENPCQ03188 943 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 NAIF1Q69YI7 327 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-207ENST00000491052 RHBDF2Q6PJF5 856 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 SARM1Q6SZW1 724 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 TPGS1Q6ZTW0 290 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 PHLDB2Q86SQ0 1253 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 GAS2L3Q86XJ1 694 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 TMEM25Q86YD3 366 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 VSTM4Q8IW00 320 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 EXOC4Q96A65 974 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 CHFRQ96EP1 664 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 SLC2A13Q96QE2 648 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 BBS2Q9BXC9 721 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 OSBPL6Q9BZF3 934 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 SPHK2Q9NRA0 654 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 METTL5Q9NRN9 209 aaKnown RBP13.37□□□□□ -0.27
LIMK1-207ENST00000491052 ADAM22Q9P0K1 906 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 COX16Q9P0S2 106 aa13.37□□□□□ -0.27
LIMK1-207ENST00000491052 AGO1Q9UL18 857 aaKnown RBP13.37□□□□□ -0.27
LIMK1-207ENST00000491052 FANCMQ8IYD8 2048 aa13.36□□□□□ -0.27
LIMK1-207ENST00000491052 TMCO5BA8MYB1 307 aa13.36□□□□□ -0.27
LIMK1-207ENST00000491052 NEDD8-MDP1E9PL57 170 aa13.36□□□□□ -0.27
LIMK1-207ENST00000491052 IRAK2O43187 625 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms