RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 WSCD1Q658N2 575 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 SLC26A9Q7LBE3 791 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 KCNN1Q92952 543 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 GCNAQ96QF7 691 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 ETNK1Q9HBU6 452 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 R3HDM2Q9Y2K5 976 aaKnown RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 NR2E1Q9Y466 385 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 HES2Q9Y543 173 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 CASTOR2A6NHX0 329 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 DPYSL4O14531 572 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 LUC7L3O95232 432 aaKnown RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 LTFP02788 710 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 ZSCAN5DPP0CG00 497 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 HADHAP40939 763 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 MRPS5P82675 430 aaKnown RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 RCN2Q14257 317 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 PARP6Q2NL67 630 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 SYCP2LQ5T4T6 812 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 LLGL2Q6P1M3 1020 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 KCNT2Q6UVM3 1135 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 PIGZQ86VD9 579 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 TSPAN17Q96FV3 270 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 GAD1Q99259 594 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 SMYD2Q9NRG4 433 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 TUBGCP4Q9UGJ1 667 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 ST3GAL5Q9UNP4 418 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 F5H423 210 aaPredicted RBP7.59□□□□□ -1.2
NPHP3-208ENST00000490993 GYG2O15488 501 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 GPC4O75487 556 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 PGAM1P18669 254 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 WARSP23381 471 aaKnown RBP7.59□□□□□ -1.2
NPHP3-208ENST00000490993 ACAT1P24752 427 aaKnown RBP7.59□□□□□ -1.2
NPHP3-208ENST00000490993 RBL1P28749 1068 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 PMLP29590 882 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 YWHAHQ04917 246 aaPredicted RBP7.59□□□□□ -1.2
NPHP3-208ENST00000490993 TBCCQ15814 346 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 SLC25A52Q3SY17 297 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 TAPT1Q6NXT6 567 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 DLK2Q6UY11 383 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 CKAP2Q8WWK9 683 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 E2F7Q96AV8 911 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 TLCD1Q96CP7 247 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 AGAP3Q96P47 875 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 CDK5RAP1Q96SZ6 601 aaKnown RBP7.59□□□□□ -1.2
NPHP3-208ENST00000490993 GPBP1L1Q9HC44 474 aaPredicted RBP7.59□□□□□ -1.2
NPHP3-208ENST00000490993 CNGB3Q9NQW8 809 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 FAM105AQ9NUU6 356 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 DCTN4Q9UJW0 460 aa7.59□□□□□ -1.2
NPHP3-208ENST00000490993 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 H2AFYO75367 372 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ALADP13716 330 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 PROZP22891 400 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 AMPD1P23109 780 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 CCR1P32246 355 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 MLH1P40692 756 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 NPY2RP49146 381 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 RPL10AP62906 217 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 GRIK3Q13003 919 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 MAP7Q14244 749 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ZNF235Q14590 738 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 FAXCQ5TGI0 409 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ZDHHC24Q6UX98 284 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ACAD11Q709F0 780 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 NDUFAF2Q8N183 169 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 STKLD1Q8NE28 680 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 CFAP61Q8NHU2 1237 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 SEPT8Q92599 483 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 VCXQ9H320 206 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 PCDH18Q9HCL0 1135 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 OLA1Q9NTK5 396 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 PCMTD2Q9NV79 361 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 CNTN3Q9P232 1028 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 A0A0A0MRY4 1105 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 RBM47A0AV96 593 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 BCLAF3A2AJT9 711 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 C2CD4BA6NLJ0 364 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 TIMM44O43615 452 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 S100BP04271 92 aaPredicted RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 GPD2P43304 727 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 INCA1Q0VD86 236 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 DNAJC3Q13217 504 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 SPANXN3Q5MJ09 141 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 DAB2IPQ5VWQ8 1189 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ZNF280DQ6N043 979 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 C12orf29Q8N999 325 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 PRCCQ92733 491 aaPredicted RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 APOPT1Q96IL0 206 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 SPATA13Q96N96 652 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 HNRNPABQ99729 332 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 TRIM56Q9BRZ2 755 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 MINDY3Q9H8M7 445 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 MRGBPQ9NV56 204 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 LGALS13Q9UHV8 139 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 TCEA3O75764 348 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ETS1P14921 441 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 GABRB2P47870 512 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 MGAT5Q09328 741 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 MUM1Q2TAK8 710 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 PDCD7Q8N8D1 485 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 THOC1Q96FV9 657 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms