RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 CAVIN2O95810 425 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 CORO1AP31146 461 aaKnown RBP16.07■□□□□ 0.16
VPS26A-207ENST00000490696 EIF2DP41214 584 aaKnown RBP16.07■□□□□ 0.16
VPS26A-207ENST00000490696 SLC6A11P48066 632 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 GAD2Q05329 585 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 BEND5Q7L4P6 421 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 ETFBKMTQ8IXQ9 262 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 SPEM1Q8N4L4 309 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 GOLGA1Q92805 767 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 ATOH1Q92858 354 aaPredicted RBP16.07■□□□□ 0.16
VPS26A-207ENST00000490696 FAM149B1Q96BN6 582 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 PLD4Q96BZ4 506 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 PIWIL1Q96J94 861 aaKnown RBP16.07■□□□□ 0.16
VPS26A-207ENST00000490696 PCMTD1Q96MG8 357 aaPredicted RBP16.07■□□□□ 0.16
VPS26A-207ENST00000490696 NOX5Q96PH1 765 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 SPAG5Q96R06 1193 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 DCLK3Q9C098 648 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 MARK1Q9P0L2 795 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 NOCTQ9UK39 431 aaKnown RBP16.07■□□□□ 0.16
VPS26A-207ENST00000490696 AGO1Q9UL18 857 aaKnown RBP16.07■□□□□ 0.16
VPS26A-207ENST00000490696 CEP83Q9Y592 693 aa16.07■□□□□ 0.16
VPS26A-207ENST00000490696 ATG2BQ96BY7 2078 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 A0A1B0GTH6 734 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 MSI1O43347 362 aaKnown RBP16.06■□□□□ 0.16
VPS26A-207ENST00000490696 ERBB2P04626 1255 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 SP9P0CG40 484 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 NCAM1P13591 858 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 STAT1P42224 750 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 MESP2Q0VG99 397 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 FBXO43Q4G163 708 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 PTPN20Q4JDL3 420 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 TAF3Q5VWG9 929 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 DENND1CQ8IV53 801 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 TMEM35BQ8NCS4 154 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 DQX1Q8TE96 717 aaKnown RBP16.06■□□□□ 0.16
VPS26A-207ENST00000490696 P2RY11Q96G91 374 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 NAP1L5Q96NT1 182 aaPredicted RBP16.06■□□□□ 0.16
VPS26A-207ENST00000490696 FAM86C1Q9NVL1 165 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 FBXO4Q9UKT5 387 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 NAALADL1Q9UQQ1 740 aa16.06■□□□□ 0.16
VPS26A-207ENST00000490696 RNF40O75150 1001 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 IGLV3-27P01718 113 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 MMEP08473 750 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 TDGF1P13385 188 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 YWHAZP63104 245 aaKnown RBP16.05■□□□□ 0.16
VPS26A-207ENST00000490696 SATB1Q01826 763 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 TAF5Q15542 800 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 ANO4Q32M45 955 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 FILIP1LQ4L180 1135 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 SYPL2Q5VXT5 272 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 PKN3Q6P5Z2 889 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 OLFML1Q6UWY5 402 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 TPGS1Q6ZTW0 290 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 FAM183BPQ6ZVS7 135 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 ZNF677Q86XU0 584 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 FAM217AQ8IXS0 508 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 PHTF2Q8N3S3 785 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 SLC20A1Q8WUM9 679 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 PNKPQ96T60 521 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 TRIM62Q9BVG3 475 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 PDCL3Q9H2J4 239 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 POPDC2Q9HBU9 364 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 ASNSD1Q9NWL6 643 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 C2orf42Q9NWW7 574 aa16.05■□□□□ 0.16
VPS26A-207ENST00000490696 A0A0A0MRY4 1105 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 K7EQS6 105 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 CACNG3O60359 315 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 TULP3O75386 442 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 PAPSS2O95340 614 aaPredicted RBP16.04■□□□□ 0.16
VPS26A-207ENST00000490696 LSM8O95777 96 aaKnown RBP16.04■□□□□ 0.16
VPS26A-207ENST00000490696 GLI1P08151 1106 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 CHRM1P11229 460 aaPredicted RBP16.04■□□□□ 0.16
VPS26A-207ENST00000490696 CHRNB2P17787 502 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 CHKAP35790 457 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 HARS2P49590 506 aaKnown RBP16.04■□□□□ 0.16
VPS26A-207ENST00000490696 CCR3P51677 355 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 CDR2Q01850 454 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 CSTF1Q05048 431 aaKnown RBP16.04■□□□□ 0.16
VPS26A-207ENST00000490696 RING1Q06587 406 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 NNTQ13423 1086 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 NR1I3Q14994 352 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 ZNF528Q3MIS6 628 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 SFTPA1Q8IWL2 248 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 CPXM2Q8N436 756 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 NAT16Q8N8M0 369 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
VPS26A-207ENST00000490696 PHOX2BQ99453 314 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 BBS2Q9BXC9 721 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 WDR35Q9P2L0 1181 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 STOML2Q9UJZ1 356 aa16.04■□□□□ 0.16
VPS26A-207ENST00000490696 VPS13AQ96RL7 3174 aa16.03■□□□□ 0.16
VPS26A-207ENST00000490696 A0A1W2PQC6 194 aa16.03■□□□□ 0.16
VPS26A-207ENST00000490696 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.03■□□□□ 0.16
VPS26A-207ENST00000490696 CHURC1-FNTBB4DL54 471 aa16.03■□□□□ 0.16
VPS26A-207ENST00000490696 NEDD8-MDP1E9PL57 170 aa16.03■□□□□ 0.16
VPS26A-207ENST00000490696 HSF2BPO75031 334 aa16.03■□□□□ 0.16
VPS26A-207ENST00000490696 KAT7O95251 611 aa16.03■□□□□ 0.16
VPS26A-207ENST00000490696 LATS1O95835 1130 aa16.03■□□□□ 0.16
VPS26A-207ENST00000490696 SERPINC1P01008 464 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms