RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TCRBV21S2A2A0A5A6 115 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 LNP1A1A4G5 178 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 NEDD8-MDP1E9PL57 170 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 BEST1O76090 585 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 KCNK5O95279 499 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 FGFR1OPO95684 399 aaKnown RBP10.88□□□□□ -0.67
TTC28-207ENST00000490475 CYBBP04839 570 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 IRF1P10914 325 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 RARGP13631 454 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 CEACAM1P13688 526 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 HOXB2P14652 356 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 TYRP14679 529 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 CD58P19256 250 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 ERCC5P28715 1186 aaPredicted RBP10.88□□□□□ -0.67
TTC28-207ENST00000490475 PMLP29590 882 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 HOXC13P31276 330 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 DGKGP49619 791 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 MARSP56192 900 aaKnown RBP10.88□□□□□ -0.67
TTC28-207ENST00000490475 ZNF445P59923 1031 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 KCNH2Q12809 1159 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 LRMPQ12912 555 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 TPD52L1Q16890 204 aaPredicted RBP10.88□□□□□ -0.67
TTC28-207ENST00000490475 HSP90AA4PQ58FG1 418 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 C10orf120Q5SQS8 335 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 LYSMD4Q5XG99 296 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 SASS6Q6UVJ0 657 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 C12orf40Q86WS4 652 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 TMEM25Q86YD3 366 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 CHPFQ8IZ52 775 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 PIGKQ92643 395 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 HEXIM2Q96MH2 286 aaKnown RBP10.88□□□□□ -0.67
TTC28-207ENST00000490475 SLC32A1Q9H598 525 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 OLA1Q9NTK5 396 aaKnown RBP10.88□□□□□ -0.67
TTC28-207ENST00000490475 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.88□□□□□ -0.67
TTC28-207ENST00000490475 POLR3BQ9NW08 1133 aaPredicted RBP10.88□□□□□ -0.67
TTC28-207ENST00000490475 HMGXB4Q9UGU5 601 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 NAGPAQ9UK23 515 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 COQ4Q9Y3A0 265 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 USP3Q9Y6I4 520 aa10.88□□□□□ -0.67
TTC28-207ENST00000490475 MAP1BP46821 2468 aaKnown RBP10.87□□□□□ -0.67
TTC28-207ENST00000490475 C4orf47A7E2U8 309 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 HHLA1C9JL84 531 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 ADAM23O75077 832 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 HNRNPLP14866 589 aaKnown RBP eCLIP10.87□□□□□ -0.676e-9■□□□□ 9.4
TTC28-207ENST00000490475 RDXP35241 583 aaKnown RBP10.87□□□□□ -0.67
TTC28-207ENST00000490475 NOVA1P51513 510 aaKnown RBP10.87□□□□□ -0.67
TTC28-207ENST00000490475 ATXN3P54252 364 aaPredicted RBP10.87□□□□□ -0.67
TTC28-207ENST00000490475 HNRNPDQ14103 355 aaKnown RBP10.87□□□□□ -0.67
TTC28-207ENST00000490475 STARD3Q14849 445 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 ST3GAL2Q16842 350 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 DUOXA1Q1HG43 343 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 TRIM61Q5EBN2 209 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 N4BP2L1Q5TBK1 243 aaPredicted RBP10.87□□□□□ -0.67
TTC28-207ENST00000490475 CAVIN1Q6NZI2 390 aaKnown RBP10.87□□□□□ -0.67
TTC28-207ENST00000490475 SLC23A3Q6PIS1 610 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 NAT16Q8N8M0 369 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 EHBP1Q8NDI1 1231 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 LMO3Q8TAP4 145 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 FOXJ1Q92949 421 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 TMEM176AQ96HP8 235 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 TWNKQ96RR1 684 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 ARID3AQ99856 593 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 RXFP3Q9NSD7 469 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 SAMSN1Q9NSI8 373 aaKnown RBP10.87□□□□□ -0.67
TTC28-207ENST00000490475 SUSD2Q9UGT4 822 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 DACH1Q9UI36 760 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 SLC27A6Q9Y2P4 619 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.87□□□□□ -0.67
TTC28-207ENST00000490475 CEP192Q8TEP8 1941 aa10.87□□□□□ -0.67
TTC28-207ENST00000490475 A0A1W2PQH9 124 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 GOLGA6L3A6NEY3 463 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 PCNX2A6NKB5 2137 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 SCAMP3O14828 347 aaKnown RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 PMM2O15305 246 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 CYP26A1O43174 497 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 TIMM44O43615 452 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 GREM1O60565 184 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 AFPP02771 609 aaKnown RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 BCKDHBP21953 392 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 TBXAS1P24557 533 aaPredicted RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 RPL6Q02878 288 aaKnown RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 GFPT1Q06210 699 aaPredicted RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 CETN1Q12798 172 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 EIF4HQ15056 248 aaKnown RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 MAP7D1Q3KQU3 841 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 ZNF394Q53GI3 561 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 CT47A1Q5JQC4 288 aaPredicted RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 SYCP2LQ5T4T6 812 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 PPP1R26Q5T8A7 1209 aaPredicted RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 EMC10Q5UCC4 262 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 PEAR1Q5VY43 1037 aaPredicted RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 ARHGAP17Q68EM7 881 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 TCEAL6Q6IPX3 200 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 PSAPL1Q6NUJ1 521 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 Q6ZNB5 142 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 TPGS1Q6ZTW0 290 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 C11orf57Q6ZUT1 292 aaPredicted RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 RSRC2Q7L4I2 434 aaKnown RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 METTL3Q86U44 580 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms