RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 SYCP2LQ5T4T6 812 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 KRT39Q6A163 491 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 KIAA1211LQ6NV74 962 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 Q6ZNB5 142 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 RGL4Q8IZJ4 473 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 GUF1Q8N442 669 aaKnown RBP18.69■□□□□ 0.58
YIPF3-208ENST00000490447 TTC39CQ8N584 583 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 HEXIM2Q96MH2 286 aaKnown RBP18.69■□□□□ 0.58
YIPF3-208ENST00000490447 HSPA12BQ96MM6 686 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 DCLK3Q9C098 648 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 CLIC5Q9NZA1 410 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 RAD54BQ9Y620 910 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 WDFY3Q8IZQ1 3526 aa18.69■□□□□ 0.58
YIPF3-208ENST00000490447 MYH10P35580 1976 aa18.68■□□□□ 0.58
YIPF3-208ENST00000490447 SYPP08247 313 aa18.68■□□□□ 0.58
YIPF3-208ENST00000490447 EFEMP1Q12805 493 aa18.68■□□□□ 0.58
YIPF3-208ENST00000490447 KIAA1324Q6UXG2 1013 aaKnown RBP18.68■□□□□ 0.58
YIPF3-208ENST00000490447 ARHGAP18Q8N392 663 aa18.68■□□□□ 0.58
YIPF3-208ENST00000490447 ZNF276Q8N554 614 aa18.68■□□□□ 0.58
YIPF3-208ENST00000490447 TRIML1Q8N9V2 468 aa18.68■□□□□ 0.58
YIPF3-208ENST00000490447 CCDC34Q96HJ3 373 aa18.68■□□□□ 0.58
YIPF3-208ENST00000490447 SCNM1Q9BWG6 230 aa18.68■□□□□ 0.58
YIPF3-208ENST00000490447 FSCN3Q9NQT6 498 aa18.68■□□□□ 0.58
YIPF3-208ENST00000490447 PLXND1Q9Y4D7 1925 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 A0A1W2PQD8 194 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 STX10O60499 249 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 CYBBP04839 570 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 HMBSP08397 361 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 CISD3P0C7P0 127 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 GTF2H1P32780 548 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 RDXP35241 583 aaKnown RBP18.67■□□□□ 0.58
YIPF3-208ENST00000490447 MXI1P50539 228 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 DPYDQ12882 1025 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 E2F5Q15329 346 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 RSRC2Q7L4I2 434 aaKnown RBP18.67■□□□□ 0.58
YIPF3-208ENST00000490447 SCD5Q86SK9 330 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 SLC41A1Q8IVJ1 513 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 MINDY1Q8N5J2 469 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 UCMAQ8WVF2 138 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 FOXJ1Q92949 421 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 MRGPRX1Q96LB2 322 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 FAM124BQ9H5Z6 455 aaPredicted RBP18.67■□□□□ 0.58
YIPF3-208ENST00000490447 CAPN10Q9HC96 672 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 CD248Q9HCU0 757 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 SUSD2Q9UGT4 822 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 STRIP2Q9ULQ0 834 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 USP3Q9Y6I4 520 aa18.67■□□□□ 0.58
YIPF3-208ENST00000490447 TNRC6BQ9UPQ9 1833 aaKnown RBP18.66■□□□□ 0.58
YIPF3-208ENST00000490447 UPK3BL1B0FP48 263 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 UPK3BL2E5RIL1 263 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 ARHGAP33O14559 1287 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 NPC1O15118 1278 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 GNSP15586 552 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 CORO1AP31146 461 aaKnown RBP18.66■□□□□ 0.58
YIPF3-208ENST00000490447 SIM1P81133 766 aaPredicted RBP18.66■□□□□ 0.58
YIPF3-208ENST00000490447 SEMA3BQ13214 749 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 WDR45BQ5MNZ6 344 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 KRBA2Q6ZNG9 492 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 FBXL13Q8NEE6 735 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 TMEM176AQ96HP8 235 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 FAXDC2Q96IV6 333 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 SLC6A17Q9H1V8 727 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 CISHQ9NSE2 258 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 RAB20Q9NX57 234 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 ZMIZ1Q9ULJ6 1067 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 WASF3Q9UPY6 502 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 SLC27A6Q9Y2P4 619 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 ATP6V1DQ9Y5K8 247 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 STON1Q9Y6Q2 735 aa18.66■□□□□ 0.58
YIPF3-208ENST00000490447 FAM237AA0A1B0GTK4 181 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 TMEM8BA6NDV4 472 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 WASH3PC4AMC7 463 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 SYNCRIPO60506 623 aaKnown RBP18.65■□□□□ 0.58
YIPF3-208ENST00000490447 TOP3BO95985 862 aaKnown RBP18.65■□□□□ 0.58
YIPF3-208ENST00000490447 PENKP01210 267 aaPredicted RBP18.65■□□□□ 0.58
YIPF3-208ENST00000490447 EPB41P11171 864 aaKnown RBP18.65■□□□□ 0.58
YIPF3-208ENST00000490447 ZNF132P52740 706 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 MFAP3P55082 362 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 EDRF1Q3B7T1 1238 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 PLEKHG6Q3KR16 790 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 FYB2Q5VWT5 728 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 ANKS1BQ7Z6G8 1248 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 PIP4P1Q86T03 277 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 SCAND2PQ9GZW5 306 aaPredicted RBP18.65■□□□□ 0.58
YIPF3-208ENST00000490447 PRDM16Q9HAZ2 1276 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 FBXO10Q9UK96 956 aa18.65■□□□□ 0.58
YIPF3-208ENST00000490447 SPAARA0A1B0GVQ0 90 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 MEI4A8MW99 385 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 CETN3O15182 167 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 KLKB1P03952 638 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 CD6P30203 668 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 YWHAGP61981 247 aaKnown RBP eCLIP18.64■□□□□ 0.57
YIPF3-208ENST00000490447 ARID5AQ03989 594 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 FUT11Q495W5 492 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 PIGZQ86VD9 579 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 DENND1CQ8IV53 801 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 SLC4A11Q8NBS3 891 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 ZNF419Q96HQ0 510 aaPredicted RBP18.64■□□□□ 0.57
YIPF3-208ENST00000490447 UBXN6Q9BZV1 441 aa18.64■□□□□ 0.57
YIPF3-208ENST00000490447 CD93Q9NPY3 652 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms