RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 FOXD2O60548 495 aaPredicted RBP18.25■□□□□ 0.51
SEC13-218ENST00000490283 LETM1O95202 739 aaPredicted RBP18.25■□□□□ 0.51
SEC13-218ENST00000490283 SDHBP21912 280 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 USP8P40818 1118 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 KIR2DL1P43626 348 aaPredicted RBP18.25■□□□□ 0.51
SEC13-218ENST00000490283 ACADSBP45954 432 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 DGKGP49619 791 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 SPEM2Q0P670 501 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 MESP2Q0VG99 397 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 MAN2A1Q16706 1144 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 DPCR1Q3MIW9 517 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 USP39Q53GS9 565 aaKnown RBP18.25■□□□□ 0.51
SEC13-218ENST00000490283 SDE2Q6IQ49 451 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 PMF1Q6P1K2 205 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 C11orf74Q86VG3 221 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 DENND1CQ8IV53 801 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 FMNL3Q8IVF7 1028 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 BHMTQ93088 406 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 LOXL4Q96JB6 756 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 ST7Q9NRC1 585 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 BCCIPQ9P287 314 aaKnown RBP eCLIP18.25■□□□□ 0.51
SEC13-218ENST00000490283 APEX2Q9UBZ4 518 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 CNTN6Q9UQ52 1028 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 PRR5-ARHGAP8B1AHC4 643 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 THAP12O43422 761 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 RHOBTB1O94844 696 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 KLKB1P03952 638 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 PRKCSHP14314 528 aaPredicted RBP18.24■□□□□ 0.51
SEC13-218ENST00000490283 GNA15P30679 374 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 ARHGAP8P85298 464 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 MEA1Q16626 185 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 ARHGAP44Q17R89 818 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 CT47A1Q5JQC4 288 aaPredicted RBP18.24■□□□□ 0.51
SEC13-218ENST00000490283 BHLHA9Q7RTU4 235 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 SFTPA1Q8IWL2 248 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 MED15Q96RN5 788 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 ZSWIM1Q9BR11 485 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 TRIM62Q9BVG3 475 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 LMBRD1Q9NUN5 540 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 PLK2Q9NYY3 685 aa18.24■□□□□ 0.51
SEC13-218ENST00000490283 AGO1Q9UL18 857 aaKnown RBP18.24■□□□□ 0.51
SEC13-218ENST00000490283 SGK1O00141 431 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 PIK3R2O00459 728 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 PES1O00541 588 aaKnown RBP18.23■□□□□ 0.51
SEC13-218ENST00000490283 CALCAP01258 141 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 LTFP02788 710 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 SLC9A1P19634 815 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 GBP1P32455 592 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 ZNF445P59923 1031 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 E2F5Q15329 346 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 TRIP4Q15650 581 aaPredicted RBP18.23■□□□□ 0.51
SEC13-218ENST00000490283 EMC10Q5UCC4 262 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 KBTBD6Q86V97 674 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 IRF2BP1Q8IU81 584 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 PGBD3Q8N328 593 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 CPXM2Q8N436 756 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 SPACA7Q96KW9 195 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 TPSD1Q9BZJ3 242 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 MIS12Q9H081 205 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 SFMBT1Q9UHJ3 866 aa18.23■□□□□ 0.51
SEC13-218ENST00000490283 PENKP01210 267 aaPredicted RBP18.22■□□□□ 0.51
SEC13-218ENST00000490283 NTSR1P30989 418 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 SMYD5Q6GMV2 418 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 GJB7Q6PEY0 223 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 RASSF3Q86WH2 238 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 CHPFQ8IZ52 775 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 MDGA1Q8NFP4 955 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 DDI1Q8WTU0 396 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 FAM149B1Q96BN6 582 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 ZC3H10Q96K80 434 aaKnown RBP18.22■□□□□ 0.51
SEC13-218ENST00000490283 TUBGCP2Q9BSJ2 902 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 NDST4Q9H3R1 872 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 SEMA4GQ9NTN9 838 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 CDV3Q9UKY7 258 aaKnown RBP18.22■□□□□ 0.51
SEC13-218ENST00000490283 STARD13Q9Y3M8 1113 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 ATG2BQ96BY7 2078 aa18.22■□□□□ 0.51
SEC13-218ENST00000490283 TCRBV21S2A2A0A5A6 115 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 TRIM24O15164 1050 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 LATS1O95835 1130 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 NCAM1P13591 858 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 HOXB2P14652 356 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 PON1P27169 355 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 GPD2P43304 727 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 BYSLQ13895 437 aaKnown RBP18.21■□□□□ 0.51
SEC13-218ENST00000490283 PUM1Q14671 1186 aaKnown RBP eCLIP18.21■□□□□ 0.51
SEC13-218ENST00000490283 CSRP2Q16527 193 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 VWA3BQ502W6 1294 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 MPPE1Q53F39 396 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 FYB2Q5VWT5 728 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 NUGGCQ68CJ6 796 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 MSANTD2Q6P1R3 559 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 TMEM92Q6UXU6 159 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 UNC45BQ8IWX7 931 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 STK32AQ8WU08 396 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 UCMAQ8WVF2 138 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 HMGB4Q8WW32 186 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 ZNF606Q8WXB4 792 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 PARD6AQ9NPB6 346 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 ZDHHC4Q9NPG8 344 aa18.21■□□□□ 0.51
SEC13-218ENST00000490283 PCDHGA5Q9Y5G8 931 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms