RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 SIGLEC16A6NMB1 481 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 NARSO43776 548 aaKnown RBP17.46■□□□□ 0.39
SFXN5-220ENST00000490056 STC2O76061 302 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 TRUB2O95900 331 aaKnown RBP17.46■□□□□ 0.39
SFXN5-220ENST00000490056 TCF3P15923 654 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 PSMC3P17980 439 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 RFC1P35251 1148 aaPredicted RBP17.46■□□□□ 0.39
SFXN5-220ENST00000490056 GSDMDP57764 484 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 RPL7AP62424 266 aaKnown RBP17.46■□□□□ 0.39
SFXN5-220ENST00000490056 MAMLD1Q13495 774 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 PLEKHA7Q6IQ23 1121 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 RAD9BQ6WBX8 426 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 RXFP2Q8WXD0 754 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 ASIC4Q96FT7 647 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 DDX23Q9BUQ8 820 aaKnown RBP17.46■□□□□ 0.39
SFXN5-220ENST00000490056 COX16Q9P0S2 106 aa17.46■□□□□ 0.39
SFXN5-220ENST00000490056 GREM1O60565 184 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 PDGFRAP16234 1089 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 GDI1P31150 447 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 TBX4P57082 545 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 COG7P83436 770 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 TDGQ13569 410 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 TRIP4Q15650 581 aaPredicted RBP17.45■□□□□ 0.38
SFXN5-220ENST00000490056 PPP1R15BQ5SWA1 713 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 OTUD1Q5VV17 481 aaPredicted RBP17.45■□□□□ 0.38
SFXN5-220ENST00000490056 DDX42Q86XP3 938 aaKnown RBP eCLIP17.45■□□□□ 0.38
SFXN5-220ENST00000490056 YAF2Q8IY57 180 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 CCDC170Q8IYT3 715 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 DEPDC1BQ8WUY9 529 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 ARHGEF26Q96DR7 871 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 TRIM11Q96F44 468 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 CFAP57Q96MR6 1250 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 MCEEQ96PE7 176 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 TBCBQ99426 244 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 NPY6RQ99463 290 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 TRMT61BQ9BVS5 477 aaKnown RBP17.45■□□□□ 0.38
SFXN5-220ENST00000490056 LINC00597Q9H2U6 94 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 FAM204AQ9H8W3 233 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 PARVAQ9NVD7 372 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 CALCOCO1Q9P1Z2 691 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 SH3BP1Q9Y3L3 701 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 HBS1LQ9Y450 684 aaKnown RBP17.45■□□□□ 0.38
SFXN5-220ENST00000490056 WNT6Q9Y6F9 365 aa17.45■□□□□ 0.38
SFXN5-220ENST00000490056 UNC80Q8N2C7 3258 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 ANKRD62A6NC57 917 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 C2CD4BA6NLJ0 364 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 M0QYT0 321 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 IRAK2O43187 625 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 IGLV3-25P01717 112 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 KLKB1P03952 638 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 H2AFZP0C0S5 128 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 MYBL1P10243 752 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 CYLC1P35663 651 aaPredicted RBP17.44■□□□□ 0.38
SFXN5-220ENST00000490056 SULT1E1P49888 294 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 GPC5P78333 572 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 FCHO2Q0JRZ9 810 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 NME3Q13232 169 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 RAB6CQ53S08 254 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 TRIM68Q6AZZ1 485 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 DCUN1D2Q6PH85 259 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 H2AFVQ71UI9 128 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 ARCQ7LC44 396 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 ANP32BQ92688 251 aaKnown RBP17.44■□□□□ 0.38
SFXN5-220ENST00000490056 SERPINB11Q96P15 392 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 TRIM7Q9C029 511 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 RAB6CQ9H0N0 254 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 THG1LQ9NWX6 298 aaKnown RBP17.44■□□□□ 0.38
SFXN5-220ENST00000490056 DDIT4Q9NX09 232 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 MUTYHQ9UIF7 546 aa17.44■□□□□ 0.38
SFXN5-220ENST00000490056 EPN1Q9Y6I3 576 aaPredicted RBP17.44■□□□□ 0.38
SFXN5-220ENST00000490056 E2F8A0AVK6 867 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 NDUFA10O95299 355 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 CYP1A2P05177 515 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 CORO1AP31146 461 aaKnown RBP17.43■□□□□ 0.38
SFXN5-220ENST00000490056 ATXN1P54253 815 aaKnown RBP17.43■□□□□ 0.38
SFXN5-220ENST00000490056 ATP11AP98196 1134 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 OGDHQ02218 1023 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 C15orf59Q2T9L4 293 aaPredicted RBP17.43■□□□□ 0.38
SFXN5-220ENST00000490056 SLC25A52Q3SY17 297 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 CCDC14Q49A88 953 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 ZC3H12AQ5D1E8 599 aaKnown RBP17.43■□□□□ 0.38
SFXN5-220ENST00000490056 SH3PXD2AQ5TCZ1 1133 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 CC2D1AQ6P1N0 951 aaPredicted RBP17.43■□□□□ 0.38
SFXN5-220ENST00000490056 HTR3DQ70Z44 454 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 BBS7Q8IWZ6 715 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 NT5C3BQ969T7 300 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 PLD4Q96BZ4 506 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 FCRL2Q96LA5 508 aaPredicted RBP17.43■□□□□ 0.38
SFXN5-220ENST00000490056 BRD9Q9H8M2 597 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 DUS2Q9NX74 493 aaKnown RBP17.43■□□□□ 0.38
SFXN5-220ENST00000490056 STAP1Q9ULZ2 295 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 SORCS3Q9UPU3 1222 aa17.43■□□□□ 0.38
SFXN5-220ENST00000490056 TMEM191CA6NGB0 347 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 EIF3CLB5ME19 914 aaKnown RBP17.42■□□□□ 0.38
SFXN5-220ENST00000490056 CHADO15335 359 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 LCA5LO95447 670 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 IGLV3-27P01718 113 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 ARSAP15289 507 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 GPD1P21695 349 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 GBP1P32455 592 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms