RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 LRRC49Q8IUZ0 686 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 UBE2E3Q969T4 207 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 PPP1R10Q96QC0 940 aaKnown RBP9.09□□□□□ -0.95
LSAMP-205ENST00000490035 CPVLQ9H3G5 476 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 MSH4O15457 936 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 RRM1P23921 792 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 TCF7P36402 384 aaPredicted RBP9.09□□□□□ -0.95
LSAMP-205ENST00000490035 LYPLAL1Q5VWZ2 237 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 ADGRF2Q8IZF7 708 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 MOSPD2Q8NHP6 518 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 SKA1Q96BD8 255 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 PRR23AA6NEV1 266 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF467Q7Z7K2 595 aaPredicted RBP9.09□□□□□ -0.95
LSAMP-205ENST00000490035 SH2D3CQ8N5H7 860 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 TDRD5Q8NAT2 981 aaKnown RBP9.09□□□□□ -0.95
LSAMP-205ENST00000490035 SPIRE2Q8WWL2 714 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 FBXO32Q969P5 355 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 THAP2Q9H0W7 228 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 KRT34O76011 436 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 SERPINF2P08697 491 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 BLVRAP53004 296 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 SAMD4BQ5PRF9 694 aaKnown RBP9.09□□□□□ -0.95
LSAMP-205ENST00000490035 PDPK2PQ6A1A2 396 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 STRA8Q7Z7C7 330 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 DPF2Q92785 391 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 TRAPPC9Q96Q05 1148 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 FAM124BQ9H5Z6 455 aaPredicted RBP9.09□□□□□ -0.95
LSAMP-205ENST00000490035 MIEF1Q9NQG6 463 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 TMEM216Q9P0N5 145 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 DLGAP2Q9P1A6 1054 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 ARHGAP23Q9P227 1491 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 PIK3R1P27986 724 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 EPHB3P54753 998 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 CREMQ03060 361 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 SCARF1Q14162 830 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 ATAD3BQ5T9A4 648 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 MTERF3Q96E29 417 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 BBS2Q9BXC9 721 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 KCTD10Q9H3F6 313 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 RPS6KB2Q9UBS0 482 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 TSC22D4Q9Y3Q8 395 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 PCDHA3Q9Y5H8 950 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 FOXN1O15353 648 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 SERPINE1P05121 402 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 ITGB6P18564 788 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 BACE1P56817 501 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 RPS6P62753 249 aaKnown RBP9.09□□□□□ -0.95
LSAMP-205ENST00000490035 CYP24A1Q07973 514 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 ERAP2Q6P179 960 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 TXNRD3Q86VQ6 643 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 GALNT4Q8N4A0 578 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 ACTRT2Q8TDY3 377 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 OSBPL10Q9BXB5 764 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 SPON1Q9HCB6 807 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 MFHAS1Q9Y4C4 1052 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 HPCAL1P37235 193 aa9.09□□□□□ -0.96
LSAMP-205ENST00000490035 MAPK8P45983 427 aa9.09□□□□□ -0.96
LSAMP-205ENST00000490035 FKBP1CQ5VVH2 108 aa9.09□□□□□ -0.96
LSAMP-205ENST00000490035 TMEM132CQ8N3T6 1108 aa9.09□□□□□ -0.96
LSAMP-205ENST00000490035 RPRD1AQ96P16 312 aaPredicted RBP9.09□□□□□ -0.96
LSAMP-205ENST00000490035 FAM111AQ96PZ2 611 aa9.09□□□□□ -0.96
LSAMP-205ENST00000490035 KCNQ5Q9NR82 932 aa9.09□□□□□ -0.96
LSAMP-205ENST00000490035 MARCOQ9UEW3 520 aaPredicted RBP9.09□□□□□ -0.96
LSAMP-205ENST00000490035 SPATA31D1Q6ZQQ2 1576 aa9.09□□□□□ -0.96
LSAMP-205ENST00000490035 GP5P40197 560 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 NEK5Q6P3R8 708 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 ZNF507Q8TCN5 953 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 TARS2Q9BW92 718 aaKnown RBP9.08□□□□□ -0.96
LSAMP-205ENST00000490035 DCLK3Q9C098 648 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 EXOSC4Q9NPD3 245 aaKnown RBP9.08□□□□□ -0.96
LSAMP-205ENST00000490035 TAS2R13Q9NYV9 303 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 RIMS1Q86UR5 1692 aaKnown RBP9.08□□□□□ -0.96
LSAMP-205ENST00000490035 PLA2G6O60733 806 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 HMGCRP04035 888 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 CPA3P15088 417 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 TMEM86AQ8N2M4 240 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 SPATA31A1Q5TZJ5 1347 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 TRIM66O15016 1216 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 WARSP23381 471 aaKnown RBP9.08□□□□□ -0.96
LSAMP-205ENST00000490035 CAP2P40123 477 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 ZC2HC1CQ53FD0 456 aaPredicted RBP9.08□□□□□ -0.96
LSAMP-205ENST00000490035 CDKAL1Q5VV42 579 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 HDDC2Q7Z4H3 204 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 ACMSDQ8TDX5 336 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 CASKIN2Q8WXE0 1202 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 CATSPER2Q96P56 530 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 RIOX1Q9H6W3 641 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 FGF10O15520 208 aaPredicted RBP9.08□□□□□ -0.96
LSAMP-205ENST00000490035 DYNC1LI2O43237 492 aaPredicted RBP9.08□□□□□ -0.96
LSAMP-205ENST00000490035 TRIM13O60858 407 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 ZNF23P17027 643 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 ZNF7P17097 686 aaPredicted RBP9.08□□□□□ -0.96
LSAMP-205ENST00000490035 GPC1P35052 558 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 GNASQ5JWF2 1037 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 ARHGAP17Q68EM7 881 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 CDC73Q6P1J9 531 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 DSG4Q86SJ6 1040 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 REXO1L1PQ8IX06 675 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 FBXO36Q8NEA4 188 aa9.08□□□□□ -0.96
LSAMP-205ENST00000490035 INPP5DQ92835 1189 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms