RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 GABRG3Q99928 467 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 EDEM2Q9BV94 578 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 DNAI2Q9GZS0 605 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 BCCIPQ9P287 314 aaKnown RBP eCLIP20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ARMCX3Q9UH62 379 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 RASAL2Q9UJF2 1139 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TSPAN16Q9UKR8 245 aa20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 AGO1Q9UL18 857 aaKnown RBP20.37■□□□□ 0.85
TNFRSF1B-202ENST00000489921 WDFY3Q8IZQ1 3526 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 GOLGA6L4A6NEF3 574 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 C4orf47A7E2U8 309 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 GABBR2O75899 941 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 HMBSP08397 361 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 HOXB2P14652 356 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CORO1AP31146 461 aaKnown RBP20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 DGKGP49619 791 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TKTL1P51854 596 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 YWHAGP61981 247 aaKnown RBP eCLIP20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 IRX4P78413 519 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 COG7P83436 770 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 GOLGA7BQ2TAP0 167 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PKDCCQ504Y2 493 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 N4BP2L1Q5TBK1 243 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 NUDT18Q6ZVK8 323 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CYP2U1Q7Z449 544 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TADA2BQ86TJ2 420 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 LMO3Q8TAP4 145 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 MAN1B1Q9UKM7 699 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CEP295Q9C0D2 2601 aa20.36■□□□□ 0.85
TNFRSF1B-202ENST00000489921 WASH3PC4AMC7 463 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 XPO1O14980 1071 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ZBED1O96006 694 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 FMO5P49326 533 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 LRMPQ12912 555 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 SPDYCQ5MJ68 293 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 LPCAT2Q7L5N7 544 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 FAM217AQ8IXS0 508 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PGBD3Q8N328 593 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 IPO4Q8TEX9 1081 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PIGKQ92643 395 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ERLEC1Q96DZ1 483 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 DHTKD1Q96HY7 919 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ZSWIM1Q9BR11 485 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ULBP1Q9BZM6 244 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 MARCH2Q9P0N8 246 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CALCOCO1Q9P1Z2 691 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CLEC4EQ9ULY5 219 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ZNF510Q9Y2H8 683 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 SLC27A6Q9Y2P4 619 aa20.35■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ADAMTS9Q9P2N4 1935 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PPP1R3GB7ZBB8 358 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 RNF225M0QZC1 329 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 O00370 1275 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 KHNYNO15037 678 aaKnown RBP20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PMM2O15305 246 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 KCNK5O95279 499 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 NDUFV2P19404 249 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 BCAT1P54687 386 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 BECN1Q14457 450 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 SGO2Q562F6 1265 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TTI2Q6NXR4 508 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ARMCX6Q7L4S7 300 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CHPFQ8IZ52 775 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ARHGAP18Q8N392 663 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 RBBP8NLQ8NC74 664 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 UBA3Q8TBC4 463 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TFAP2BQ92481 460 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PIWIL1Q96J94 861 aaKnown RBP20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 SPACA7Q96KW9 195 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 GTPBP4Q9BZE4 634 aaKnown RBP20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CACNA2D2Q9NY47 1150 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 EVLQ9UI08 416 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CIZ1Q9ULV3 898 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 RAD54BQ9Y620 910 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ZFHX4Q86UP3 3567 aa20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 MAP1BP46821 2468 aaKnown RBP20.34■□□□□ 0.85
TNFRSF1B-202ENST00000489921 MAP3K13O43283 966 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 VDRP11473 427 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PMLP29590 882 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CHKAP35790 457 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 MFAP3P55082 362 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 BST2Q10589 180 aaKnown RBP20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 BYSLQ13895 437 aaKnown RBP20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 TRIP4Q15650 581 aaPredicted RBP20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 GEN1Q17RS7 908 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PEAR1Q5VY43 1037 aaPredicted RBP20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 DENND1CQ8IV53 801 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CPXM2Q8N436 756 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 KCTD13Q8WZ19 329 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 KAT5Q92993 513 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CEP63Q96MT8 703 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 DCLK3Q9C098 648 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 SLC6A17Q9H1V8 727 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 METTL14Q9HCE5 456 aaKnown RBP20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 CD93Q9NPY3 652 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 PILRBQ9UKJ0 227 aa20.33■□□□□ 0.85
TNFRSF1B-202ENST00000489921 ASCC3Q8N3C0 2202 aaKnown RBP20.33■□□□□ 0.84
TNFRSF1B-202ENST00000489921 USP24Q9UPU5 2620 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 IGHV1OR15-9A0A0B4J2B8 117 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SLC12A8A0AV02 714 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms