RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 E5RJQ4 531 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 PAPSS1O43252 624 aaPredicted RBP19.98■□□□□ 0.79
EPHB4-207ENST00000489808 SART1O43290 800 aaKnown RBP19.98■□□□□ 0.79
EPHB4-207ENST00000489808 TULP3O75386 442 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 KAT7O95251 611 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 APODP05090 189 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 FYNP06241 537 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 CHKAP35790 457 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 GRIA2P42262 883 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 PDCLQ13371 301 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 MSANTD2Q6P1R3 559 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 APTXQ7Z2E3 356 aaKnown RBP19.98■□□□□ 0.79
EPHB4-207ENST00000489808 DENND1CQ8IV53 801 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 PASD1Q8IV76 773 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 PHTF2Q8N3S3 785 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 RPLP0P6Q8NHW5 317 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 NKD2Q969F2 451 aaPredicted RBP19.98■□□□□ 0.79
EPHB4-207ENST00000489808 PLD4Q96BZ4 506 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 FUCA2Q9BTY2 467 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 BBS2Q9BXC9 721 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 ARHGEF4Q9NR80 690 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 DEC1Q9P2X7 70 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 SIK3Q9Y2K2 1263 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 MYO15AQ9UKN7 3530 aa19.98■□□□□ 0.79
EPHB4-207ENST00000489808 DMDP11532 3685 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 LGALS16A8MUM7 142 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 NCAM1P13591 858 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 TYRP14679 529 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 CYP11B1P15538 503 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 PTMSP20962 102 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 HOXA6P31267 233 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 TNFRSF4P43489 277 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 HARS2P49590 506 aaKnown RBP19.97■□□□□ 0.79
EPHB4-207ENST00000489808 PREPLQ4J6C6 727 aaPredicted RBP19.97■□□□□ 0.79
EPHB4-207ENST00000489808 BEND5Q7L4P6 421 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 SFTPA1Q8IWL2 248 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 DHX40Q8IX18 779 aaKnown RBP19.97■□□□□ 0.79
EPHB4-207ENST00000489808 USP33Q8TEY7 942 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 PPP1R13BQ96KQ4 1090 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 XPO6Q96QU8 1125 aaKnown RBP19.97■□□□□ 0.79
EPHB4-207ENST00000489808 CPXM1Q96SM3 734 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 FAM207AQ9NSI2 230 aaPredicted RBP19.97■□□□□ 0.79
EPHB4-207ENST00000489808 NAALADL1Q9UQQ1 740 aa19.97■□□□□ 0.79
EPHB4-207ENST00000489808 HELZP42694 1942 aaKnown RBP19.97■□□□□ 0.79
EPHB4-207ENST00000489808 TBC1D3BA6NDS4 549 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 ANTXRLA6NF34 631 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 NEDD8-MDP1E9PL57 170 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 F8VZ95 297 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 LILRB5O75023 590 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 ATP1A3P13637 1013 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 HOXC13P31276 330 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 ZNF165P49910 485 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 POLR2FP61218 127 aaKnown RBP19.96■□□□□ 0.79
EPHB4-207ENST00000489808 UBXN1Q04323 297 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 SYCP1Q15431 976 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 ASCL5Q7RTU5 278 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 FAM149B1Q96BN6 582 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 NOX5Q96PH1 765 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 POLR3BQ9NW08 1133 aaPredicted RBP19.96■□□□□ 0.79
EPHB4-207ENST00000489808 TJP2Q9UDY2 1190 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 SLC8A2Q9UPR5 921 aa19.96■□□□□ 0.79
EPHB4-207ENST00000489808 PIEZO1Q92508 2521 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 PRR23AA6NEV1 266 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 TRIM24O15164 1050 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 EPHB6O15197 1021 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 MSI1O43347 362 aaKnown RBP19.95■□□□□ 0.78
EPHB4-207ENST00000489808 CACNG3O60359 315 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 GFRA3O60609 400 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 SEC13P55735 322 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 YWHAZP63104 245 aaKnown RBP19.95■□□□□ 0.78
EPHB4-207ENST00000489808 MRPS21P82921 87 aaKnown RBP19.95■□□□□ 0.78
EPHB4-207ENST00000489808 KDSRQ06136 332 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 DMWDQ09019 674 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 C2orf27AQ580R0 203 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 EMC10Q5UCC4 262 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 SYT13Q7L8C5 426 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 FAM217AQ8IXS0 508 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 CPXM2Q8N436 756 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 C1orf131Q8NDD1 294 aaKnown RBP19.95■□□□□ 0.78
EPHB4-207ENST00000489808 DDX1Q92499 740 aaKnown RBP19.95■□□□□ 0.78
EPHB4-207ENST00000489808 P2RY11Q96G91 374 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 ERGIC2Q96RQ1 377 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 TRIM62Q9BVG3 475 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 PDCL3Q9H2J4 239 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 DNAJC17Q9NVM6 304 aaKnown RBP19.95■□□□□ 0.78
EPHB4-207ENST00000489808 STOML2Q9UJZ1 356 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 FBXO10Q9UK96 956 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 DAAM1Q9Y4D1 1078 aa19.95■□□□□ 0.78
EPHB4-207ENST00000489808 SYCE3A1L190 88 aa19.94■□□□□ 0.78
EPHB4-207ENST00000489808 PENKP01210 267 aaPredicted RBP19.94■□□□□ 0.78
EPHB4-207ENST00000489808 IGLV3-27P01718 113 aa19.94■□□□□ 0.78
EPHB4-207ENST00000489808 LMNAP02545 664 aaKnown RBP19.94■□□□□ 0.78
EPHB4-207ENST00000489808 CISD3P0C7P0 127 aa19.94■□□□□ 0.78
EPHB4-207ENST00000489808 FNTBP49356 437 aa19.94■□□□□ 0.78
EPHB4-207ENST00000489808 SNX16P57768 344 aa19.94■□□□□ 0.78
EPHB4-207ENST00000489808 TAF5Q15542 800 aa19.94■□□□□ 0.78
EPHB4-207ENST00000489808 FYB2Q5VWT5 728 aa19.94■□□□□ 0.78
EPHB4-207ENST00000489808 SYPL2Q5VXT5 272 aa19.94■□□□□ 0.78
EPHB4-207ENST00000489808 GRAMD4Q6IC98 578 aa19.94■□□□□ 0.78
EPHB4-207ENST00000489808 NUDT18Q6ZVK8 323 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms