RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 TRUB2O95900 331 aaKnown RBP11.37□□□□□ -0.59
TFF3-203ENST00000489676 COL9A1P20849 921 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 SDC4P31431 198 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 MAN1A1P33908 653 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 SULT1E1P49888 294 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 HDAC4P56524 1084 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 EFEMP1Q12805 493 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 SKIV2LQ15477 1246 aaKnown RBP11.37□□□□□ -0.59
TFF3-203ENST00000489676 C15orf59Q2T9L4 293 aaPredicted RBP11.37□□□□□ -0.59
TFF3-203ENST00000489676 LEXMQ3ZCV2 418 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 C10orf120Q5SQS8 335 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 SH3PXD2AQ5TCZ1 1133 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 C11orf63Q6NUN7 778 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 GET4Q7L5D6 327 aaPredicted RBP11.37□□□□□ -0.59
TFF3-203ENST00000489676 STRADAQ7RTN6 431 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 CPNE8Q86YQ8 564 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 CMTM8Q8IZV2 173 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 CCAR2Q8N163 923 aaKnown RBP11.37□□□□□ -0.59
TFF3-203ENST00000489676 ARL14EPQ8N8R7 260 aaPredicted RBP11.37□□□□□ -0.59
TFF3-203ENST00000489676 MAB21L3Q8N8X9 362 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 LRRC57Q8N9N7 239 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 TPCN2Q8NHX9 752 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 RIN3Q8TB24 985 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 ADAM32Q8TC27 787 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 KIAA1524Q8TCG1 905 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 ADAMTS19Q8TE59 1207 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 PPM1EQ8WY54 764 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 FGF13Q92913 245 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 SLC39A13Q96H72 371 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 ZSWIM3Q96MP5 696 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 SERPINB11Q96P15 392 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 MYADMQ96S97 322 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 TRPC7Q9HCX4 862 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 PIGVQ9NUD9 493 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 MARCH2Q9P0N8 246 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 DNMT3LQ9UJW3 386 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 STAP1Q9ULZ2 295 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 ZKSCAN5Q9Y2L8 839 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 CAPN6Q9Y6Q1 641 aa11.37□□□□□ -0.59
TFF3-203ENST00000489676 TRAV19A0A0A6YYK7 116 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 GRID2IPA4D2P6 1211 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 M0QYT0 321 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 BUB1O43683 1085 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 GREM1O60565 184 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 BUB1BO60566 1050 aaPredicted RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 LRCH4O75427 683 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 PROSCO94903 275 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 CKMP06732 381 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 TCF3P15923 654 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 FCARP24071 287 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 PSMA2P25787 234 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 ATP5C1P36542 298 aaKnown RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 ATXN1P54253 815 aaKnown RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 ATP11AP98196 1134 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 RING1Q06587 406 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 USP4Q13107 963 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 ACAP1Q15027 740 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 TRIP4Q15650 581 aaPredicted RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 DAB2IPQ5VWQ8 1189 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 CYP4V2Q6ZWL3 525 aaPredicted RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 RSRC2Q7L4I2 434 aaKnown RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 TADA2BQ86TJ2 420 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 RNF139Q8WU17 664 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 FAM172AQ8WUF8 416 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 USP13Q92995 863 aaPredicted RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 FCRL2Q96LA5 508 aaPredicted RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 ASB16Q96NS5 453 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 CYP2S1Q96SQ9 504 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 KLF16Q9BXK1 252 aaPredicted RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 TRPV4Q9HBA0 871 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 DDIT4Q9NX09 232 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 GDE1Q9NZC3 331 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 IP6K2Q9UHH9 426 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 SFMBT1Q9UHJ3 866 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 LCMT1Q9UIC8 334 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 RASAL2Q9UJF2 1139 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 CDH7Q9ULB5 785 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 ARHGAP26Q9UNA1 814 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 TLR6Q9Y2C9 796 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 HBS1LQ9Y450 684 aaKnown RBP11.36□□□□□ -0.59
TFF3-203ENST00000489676 COL4A3Q01955 1670 aa11.36□□□□□ -0.59
TFF3-203ENST00000489676 MACROD2A1Z1Q3 448 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 I6L893 689 aaPredicted RBP11.35□□□□□ -0.59
TFF3-203ENST00000489676 MYO1FO00160 1098 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 ZSCAN12O43309 604 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 KRT86O43790 486 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 MOCS3O95396 460 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 TCF4P15884 667 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 HDCP19113 662 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 RDXP35241 583 aaKnown RBP11.35□□□□□ -0.59
TFF3-203ENST00000489676 CXCR3P49682 368 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 SLC25A11Q02978 314 aaKnown RBP11.35□□□□□ -0.59
TFF3-203ENST00000489676 PIGHQ14442 188 aaPredicted RBP11.35□□□□□ -0.59
TFF3-203ENST00000489676 SMAD2Q15796 467 aaKnown RBP11.35□□□□□ -0.59
TFF3-203ENST00000489676 ZNF77Q15935 545 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 ARHGAP29Q52LW3 1261 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 SLFN11Q7Z7L1 901 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 MIB1Q86YT6 1006 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 RNF10Q8N5U6 811 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms