RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ZACNQ401N2 412 aa17.87■□□□□ 0.45
TOP3B-217ENST00000489581 FUT11Q495W5 492 aa17.87■□□□□ 0.45
TOP3B-217ENST00000489581 FOXD4L5Q5VV16 416 aaPredicted RBP17.87■□□□□ 0.45
TOP3B-217ENST00000489581 Q6ZNB5 142 aa17.87■□□□□ 0.45
TOP3B-217ENST00000489581 PROSER1Q86XN7 944 aa17.87■□□□□ 0.45
TOP3B-217ENST00000489581 NAXDQ8IW45 347 aa17.87■□□□□ 0.45
TOP3B-217ENST00000489581 GOLGA5Q8TBA6 731 aa17.87■□□□□ 0.45
TOP3B-217ENST00000489581 FOXD4L4Q8WXT5 416 aaPredicted RBP17.87■□□□□ 0.45
TOP3B-217ENST00000489581 TOE1Q96GM8 510 aaKnown RBP17.87■□□□□ 0.45
TOP3B-217ENST00000489581 TWNKQ96RR1 684 aa17.87■□□□□ 0.45
TOP3B-217ENST00000489581 PRDM16Q9HAZ2 1276 aa17.87■□□□□ 0.45
TOP3B-217ENST00000489581 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.87■□□□□ 0.45
TOP3B-217ENST00000489581 WSB2Q9NYS7 404 aaPredicted RBP17.87■□□□□ 0.45
TOP3B-217ENST00000489581 FBXO10Q9UK96 956 aa17.87■□□□□ 0.45
TOP3B-217ENST00000489581 CKAP5Q14008 2032 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 URB1O60287 2271 aaKnown RBP17.86■□□□□ 0.45
TOP3B-217ENST00000489581 MEI4A8MW99 385 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 STC2O76061 302 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 RPN1P04843 607 aaKnown RBP17.86■□□□□ 0.45
TOP3B-217ENST00000489581 ASPAP45381 313 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 STARD3Q14849 445 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 ACAP1Q15027 740 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 FOXD4L6Q3SYB3 417 aaPredicted RBP17.86■□□□□ 0.45
TOP3B-217ENST00000489581 KLHDC10Q6PID8 442 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 C19orf48Q6RUI8 117 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 FOXD4L3Q6VB84 417 aaPredicted RBP17.86■□□□□ 0.45
TOP3B-217ENST00000489581 SV2AQ7L0J3 742 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 ADAMTS14Q8WXS8 1223 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 CYFIP2Q96F07 1278 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 HNRNPABQ99729 332 aaKnown RBP17.86■□□□□ 0.45
TOP3B-217ENST00000489581 GPR174Q9BXC1 333 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 MKRN2Q9H000 416 aaKnown RBP17.86■□□□□ 0.45
TOP3B-217ENST00000489581 MIR1-1HGQ9H1L0 117 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 NAGPAQ9UK23 515 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 PCDHA5Q9Y5H7 936 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 LAMA5O15230 3695 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 ASXL3Q9C0F0 2248 aa17.86■□□□□ 0.45
TOP3B-217ENST00000489581 A0A1B0GTW7 788 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 KCNJ18B7U540 433 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 KIF20AO95235 890 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 ASS1P00966 412 aaKnown RBP17.85■□□□□ 0.45
TOP3B-217ENST00000489581 HLA-DRAP01903 254 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 KLKB1P03952 638 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 NCAM1P13591 858 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 PIK3CAP42336 1068 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 IL12RB1P42701 662 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 KNTC1P50748 2209 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 STK4Q13043 487 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 GEN1Q17RS7 908 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 SCD5Q86SK9 330 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 ZCCHC9Q8N567 271 aaKnown RBP17.85■□□□□ 0.45
TOP3B-217ENST00000489581 DNASE2BQ8WZ79 361 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 TAF4BQ92750 862 aa17.85■□□□□ 0.45
TOP3B-217ENST00000489581 USP36Q9P275 1121 aaKnown RBP17.85■□□□□ 0.45
TOP3B-217ENST00000489581 KLRC4O43908 158 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 HMBSP08397 361 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 KIF11P52732 1056 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 MFAP3P55082 362 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 DCAF12L1Q5VU92 463 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 FYB2Q5VWT5 728 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 CEP135Q66GS9 1140 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 METTL3Q86U44 580 aaKnown RBP17.84■□□□□ 0.45
TOP3B-217ENST00000489581 SLCO6A1Q86UG4 719 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 TMPRSS6Q8IU80 811 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 SLC9A9Q8IVB4 645 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 KIAA0895Q8NCT3 520 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 TMC2Q8TDI7 906 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 NT5C1AQ9BXI3 368 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 ZDHHC5Q9C0B5 715 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 IL21RQ9HBE5 538 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 ITM2CQ9NQX7 267 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 FAM13BQ9NYF5 915 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 THAP10Q9P2Z0 257 aaPredicted RBP17.84■□□□□ 0.45
TOP3B-217ENST00000489581 PCDHA7Q9UN72 937 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 SLC27A6Q9Y2P4 619 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 NBEAQ8NFP9 2946 aa17.84■□□□□ 0.45
TOP3B-217ENST00000489581 CELSR3Q9NYQ7 3312 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 PENKP01210 267 aaPredicted RBP17.83■□□□□ 0.44
TOP3B-217ENST00000489581 NR3C1P04150 777 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 RALAP11233 206 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 TRIM21P19474 475 aaKnown RBP17.83■□□□□ 0.44
TOP3B-217ENST00000489581 TPMTP51580 245 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 C1orf220Q5T0J3 134 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 CCNI2Q6ZMN8 369 aaPredicted RBP17.83■□□□□ 0.44
TOP3B-217ENST00000489581 SETD7Q8WTS6 366 aaKnown RBP17.83■□□□□ 0.44
TOP3B-217ENST00000489581 UCMAQ8WVF2 138 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 SIPA1Q96FS4 1042 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 KCTD10Q9H3F6 313 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 GAREM1Q9H706 876 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 APOBEC3GQ9HC16 384 aaKnown RBP17.83■□□□□ 0.44
TOP3B-217ENST00000489581 PNPLA8Q9NP80 782 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 EXOC1Q9NV70 894 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 SERTAD1Q9UHV2 236 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 RASAL2Q9UJF2 1139 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 APOBEC2Q9Y235 224 aaKnown RBP17.83■□□□□ 0.44
TOP3B-217ENST00000489581 ZNF510Q9Y2H8 683 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 GPSM3Q9Y4H4 160 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 TMEM131Q92545 1883 aa17.83■□□□□ 0.44
TOP3B-217ENST00000489581 IKBKBO14920 756 aa17.82■□□□□ 0.44
TOP3B-217ENST00000489581 SYNCRIPO60506 623 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms