RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 HOXA6P31267 233 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 EIF4A3P38919 411 aaKnown RBP11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 USP8P40818 1118 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 GALK1P51570 392 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 SLC8A3P57103 927 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 KLHL30Q0D2K2 578 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 PPP1R26Q5T8A7 1209 aaPredicted RBP11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 ARHGAP17Q68EM7 881 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 ADGRG2Q8IZP9 1017 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 SUMF1Q8NBK3 374 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 RUBCNQ92622 972 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 OTUB2Q96DC9 234 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 ZFRQ96KR1 1074 aaKnown RBP11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 BAG1Q99933 345 aaPredicted RBP11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 EPC1Q9H2F5 836 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 CCSER2Q9H7U1 834 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 CYLDQ9NQC7 956 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 RRAGDQ9NQL2 400 aaPredicted RBP11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 REXO2Q9Y3B8 237 aaKnown RBP11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 SH3BP1Q9Y3L3 701 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 ZNF638Q14966 1978 aaKnown RBP11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 CHURC1-FNTBB4DL54 471 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 K7ESF4 209 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 LCA5LO95447 670 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 ADH1CP00326 375 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 EGFP01133 1207 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 CYP17A1P05093 508 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 MMEP08473 750 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 GNA15P30679 374 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 CNR2P34972 360 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 ATP5C1P36542 298 aaKnown RBP11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 PSEN1P49768 467 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 KIF11P52732 1056 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 CDR2Q01850 454 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 PKDCCQ504Y2 493 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 KLHDC10Q6PID8 442 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 GPRIN1Q7Z2K8 1008 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 TADA2BQ86TJ2 420 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 TTC30AQ86WT1 665 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 WDTC1Q8N5D0 677 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 ZNF606Q8WXB4 792 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 SECISBP2LQ93073 1101 aaKnown RBP11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 AGPAT1Q99943 283 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 UBXN6Q9BZV1 441 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 NHEJ1Q9H9Q4 299 aaPredicted RBP11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 FBRSL1Q9HCM7 1045 aaKnown RBP11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 CYTH4Q9UIA0 394 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 PCDHGC3Q9UN70 934 aa11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 RIF1Q5UIP0 2472 aaKnown RBP11.07□□□□□ -0.64
SCAMP4-208ENST00000489554 USP34Q70CQ2 3546 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 FANCMQ8IYD8 2048 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 HELZP42694 1942 aaKnown RBP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 DMDP11532 3685 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 A0A087X0T9 212 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 RNF40O75150 1001 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 CYP1A1P04798 512 aaPredicted RBP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 FAM228BP0C875 321 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 VDRP11473 427 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 CDH5P33151 784 aaPredicted RBP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 OPRD1P41143 372 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 EIF2DP41214 584 aaKnown RBP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 TERF1P54274 439 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 BPIFB4P59827 614 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 DHCR24Q15392 516 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 SGO2Q562F6 1265 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 TDRD12Q587J7 1177 aaKnown RBP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 TAF3Q5VWG9 929 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 NAIF1Q69YI7 327 aaPredicted RBP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 DENND1BQ6P3S1 775 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 LONP2Q86WA8 852 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 ZNF677Q86XU0 584 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 TMTC1Q8IUR5 882 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 FMNL3Q8IVF7 1028 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 ARHGAP18Q8N392 663 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 ZNF276Q8N554 614 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 ANKRD52Q8NB46 1076 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 KIAA1524Q8TCG1 905 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 ACDQ96AP0 544 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 CDK5RAP1Q96SZ6 601 aaKnown RBP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 HINFPQ9BQA5 517 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 SPTLC3Q9NUV7 552 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 TAS2R14Q9NYV8 317 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 CLIC5Q9NZA1 410 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 RAB23Q9ULC3 237 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 KIAA1257Q9ULG3 409 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 PYCARDQ9ULZ3 195 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 SLC8A2Q9UPR5 921 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 BZW2Q9Y6E2 419 aaKnown RBP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 USP3Q9Y6I4 520 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 FAM186AA6NE01 2351 aa11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 PTPRZ1P23471 2315 aaPredicted RBP11.06□□□□□ -0.64
SCAMP4-208ENST00000489554 CCDC163A0A0D9SF12 145 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 A0A1W2PQH9 124 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 KIF2AO00139 706 aaPredicted RBP11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 THAP12O43422 761 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms