RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 FAM189BP81408 668 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 MRPS5P82675 430 aaKnown RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 ZNF200P98182 395 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 CDK16Q00536 496 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 PDE4CQ08493 712 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 LPIN1Q14693 890 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 STAT4Q14765 748 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 DPYSL2Q16555 572 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 UPP1Q16831 310 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 GLRA4Q5JXX5 417 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 C9orf50Q5SZB4 431 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 CYP4A22Q5TCH4 519 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 ARMC3Q5W041 872 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 PMF1Q6P1K2 205 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 MFSD7Q6UXD7 560 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 FAM183BPQ6ZVS7 135 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 CENPUQ71F23 418 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 SPATS2Q86XZ4 545 aaKnown RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 DNAAF5Q86Y56 855 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 RFX6Q8HWS3 928 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 LRRC49Q8IUZ0 686 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 ZCCHC9Q8N567 271 aaKnown RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 ALLCQ8N6M5 410 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 SLC35B2Q8TB61 432 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 UBA3Q8TBC4 463 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 RNF217Q8TC41 542 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 SLC2A14Q8TDB8 520 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 C2orf15Q8WU43 125 aaKnown RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 FAM172AQ8WUF8 416 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 NTAN1Q96AB6 310 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 TRIM43Q96BQ3 446 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 LRRC39Q96DD0 335 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 PGAP3Q96FM1 320 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 SUSD3Q96L08 255 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 ATP6V1G3Q96LB4 118 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 SERPINB12Q96P63 405 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 ZIM3Q96PE6 472 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 TWNKQ96RR1 684 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 GAD1Q99259 594 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 CALN1Q9BXU9 219 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 FAM107BQ9H098 131 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 DPH5Q9H2P9 285 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 FBXO44Q9H4M3 255 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 RETREG1Q9H6L5 497 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 CSNK1G1Q9HCP0 422 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 DMAP1Q9NPF5 467 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 ZDHHC18Q9NUE0 388 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 DDX43Q9NXZ2 648 aaKnown RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 KLK14Q9P0G3 267 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 SENP1Q9P0U3 644 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 PAK5Q9P286 719 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 FETUBQ9UGM5 382 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 LRFN2Q9ULH4 789 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 TPX2Q9ULW0 747 aaKnown RBP6.62□□□□□ -1.35
SF3A3-208ENST00000489537 PLAAQ9Y263 795 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 ATP8A1Q9Y2Q0 1164 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 SNX24Q9Y343 169 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 HES2Q9Y543 173 aa6.62□□□□□ -1.35
SF3A3-208ENST00000489537 REV3LO60673 3130 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 CITO14578 2027 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 A0A1W2PQ45 241 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 A0A1W2PQY0 241 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 ESYT3A0FGR9 886 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 BCLAF3A2AJT9 711 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 OR6C75A6NL08 312 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 DCDC2CA8MYV0 355 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 SGK1O00141 431 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 DNALI1O14645 258 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 PPP1R12AO14974 1030 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 MEFVO15553 781 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 PAPSS1O43252 624 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 CST8O60676 142 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TTC4O95801 387 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 SYF2O95926 243 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 PFKMP08237 780 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 GSTA2P09210 222 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 PDGFRBP09619 1106 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 CTSHP09668 335 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 MYBL2P10244 700 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 GHRP10912 638 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 CKBP12277 381 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 MX2P20592 715 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 ADORA2BP29275 332 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 ECHS1P30084 290 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 CD52P31358 61 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 BMP8BP34820 402 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 RFC2P35250 354 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 RPL21P46778 160 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 ROR1Q01973 937 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 RNASELQ05823 741 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 ZNF33AQ06730 810 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 ILF2Q12905 390 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 RASA2Q15283 850 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 OASLQ15646 514 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 PTPROQ16827 1216 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TRIM71Q2Q1W2 868 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 P3H1Q32P28 736 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 KRT71Q3SY84 523 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TRIM60Q495X7 471 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 NOMO2Q5JPE7 1267 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms