RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 OLA1Q9NTK5 396 aaKnown RBP21.72■■□□□ 1.07
SND1-214ENST00000489417 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.72■■□□□ 1.07
SND1-214ENST00000489417 FZD10Q9ULW2 581 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 AP4E1Q9UPM8 1137 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 hCG_1818297A0A087WSY0 165 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 IRAK2O43187 625 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 C1RP00736 705 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 C8AP07357 584 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 CLCN4P51793 760 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 AIF1P55008 147 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 PDK2Q15119 407 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 TAZQ16635 292 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 CA9Q16790 459 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 ZC3H12AQ5D1E8 599 aaKnown RBP21.72■■□□□ 1.07
SND1-214ENST00000489417 TFDP3Q5H9I0 405 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 PSTKQ8IV42 348 aaKnown RBP21.72■■□□□ 1.07
SND1-214ENST00000489417 MAP7D3Q8IWC1 876 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 MMGT1Q8N4V1 131 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 NOA1Q8NC60 698 aaKnown RBP21.72■■□□□ 1.07
SND1-214ENST00000489417 PSMG2Q969U7 264 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 NTAN1Q96AB6 310 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 HEMGNQ9BXL5 484 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 PCDH18Q9HCL0 1135 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 TMEM51Q9NW97 253 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 NUDT5Q9UKK9 219 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 ASB3Q9Y575 518 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 GOLGA6L10A0A0M3HER8 536 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 TCRBV7S2A1N4TA0A589 114 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 CCDC188H7C350 402 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 CTIFO43310 598 aaKnown RBP21.71■■□□□ 1.07
SND1-214ENST00000489417 LRG1P02750 347 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 CD48P09326 243 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 GTF2F1P35269 517 aaKnown RBP eCLIP21.71■■□□□ 1.07
SND1-214ENST00000489417 TUBB4BP68371 445 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 EIF4EBP2Q13542 120 aaPredicted RBP21.71■■□□□ 1.07
SND1-214ENST00000489417 DPYSL2Q16555 572 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 DNAJB7Q7Z6W7 309 aaPredicted RBP21.71■■□□□ 1.07
SND1-214ENST00000489417 TDHQ8IZJ6 230 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 FAM71BQ8TC56 605 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 ZNF512Q96ME7 567 aaPredicted RBP21.71■■□□□ 1.07
SND1-214ENST00000489417 SERPINB11Q96P15 392 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 LMAN2LQ9H0V9 348 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 DHX35Q9H5Z1 703 aaKnown RBP21.71■■□□□ 1.07
SND1-214ENST00000489417 TRPM5Q9NZQ8 1165 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 UXTQ9UBK9 157 aaPredicted RBP21.71■■□□□ 1.07
SND1-214ENST00000489417 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.71■■□□□ 1.07
SND1-214ENST00000489417 SFMBT1Q9UHJ3 866 aa21.71■■□□□ 1.07
SND1-214ENST00000489417 V9GYY5 206 aaPredicted RBP21.71■■□□□ 1.07
SND1-214ENST00000489417 ZNF638Q14966 1978 aaKnown RBP21.7■■□□□ 1.06
SND1-214ENST00000489417 CLASP2O75122 1294 aaKnown RBP21.7■■□□□ 1.06
SND1-214ENST00000489417 KRT10P13645 584 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 ADRA1BP35368 520 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 DPYSL3Q14195 570 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 SNX30Q5VWJ9 437 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 KAZNQ674X7 775 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 ZNF276Q8N554 614 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 ARNTL2Q8WYA1 636 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 UBXN4Q92575 508 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 CDK5RAP1Q96SZ6 601 aaKnown RBP21.7■■□□□ 1.06
SND1-214ENST00000489417 CALN1Q9BXU9 219 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 WDCPQ9H6R7 721 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 SLC28A3Q9HAS3 691 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 EFR3BQ9Y2G0 817 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 NR2E1Q9Y466 385 aa21.7■■□□□ 1.06
SND1-214ENST00000489417 UQCRHLA0A096LP55 91 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 ZNF840PA6NDX5 716 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 MSI1O43347 362 aaKnown RBP21.69■■□□□ 1.06
SND1-214ENST00000489417 UQCRHP07919 91 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 L1CAMP32004 1257 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 SCAPQ12770 1279 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 EFEMP1Q12805 493 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 KLF1Q13351 362 aaPredicted RBP21.69■■□□□ 1.06
SND1-214ENST00000489417 SIX1Q15475 284 aaPredicted RBP21.69■■□□□ 1.06
SND1-214ENST00000489417 ARL13BQ3SXY8 428 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 EFHC2Q5JST6 749 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 BRMS1LQ5PSV4 323 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 C10orf120Q5SQS8 335 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 TADA2BQ86TJ2 420 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 VSIG1Q86XK7 387 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 ZDHHC14Q8IZN3 488 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 RNF34Q969K3 372 aa21.69■■□□□ 1.06
SND1-214ENST00000489417 KCTD15Q96SI1 283 aaPredicted RBP21.69■■□□□ 1.06
SND1-214ENST00000489417 ZNF487B1APH4 448 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 TLR5O60602 858 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 TJP3O95049 919 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 PPP3CCP48454 512 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 PPM1LQ5SGD2 360 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 RTL10Q7L3V2 364 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 RFX6Q8HWS3 928 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 KLHL7Q8IXQ5 586 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 PRELID2Q8N945 189 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 SLC22A17Q8WUG5 538 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 KRT12Q99456 494 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 ZNF670Q9BS34 389 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 TKTL2Q9H0I9 626 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 PLEKHA4Q9H4M7 779 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 CCSER2Q9H7U1 834 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 ZNF334Q9HCZ1 680 aaPredicted RBP21.68■■□□□ 1.06
SND1-214ENST00000489417 TMPRSS4Q9NRS4 437 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 MTMR10Q9NXD2 777 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms