RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 CD82P27701 267 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 RPL9P32969 192 aaKnown RBP8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 RFC5P40937 340 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 ENPP2Q13822 863 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 CAPSQ13938 189 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 MXD4Q14582 209 aaPredicted RBP8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 LAPTM4AQ15012 233 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 RABEP1Q15276 862 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 NR6A1Q15406 480 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 BTBD8Q5XKL5 378 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 KIAA0895LQ68EN5 471 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 TYW1BQ6NUM6 668 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 SCFD1Q8WVM8 642 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 RUFY2Q8WXA3 655 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 P2RY11Q96G91 374 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 UNC45AQ9H3U1 944 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 RPF1Q9H9Y2 349 aaKnown RBP8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 AASDHPPTQ9NRN7 309 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 GJB4Q9NTQ9 266 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 SLC38A7Q9NVC3 462 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 UCKL1Q9NWZ5 548 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 RRN3Q9NYV6 651 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 UXTQ9UBK9 157 aaPredicted RBP8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 MAGED2Q9UNF1 606 aaPredicted RBP8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 KLF2Q9Y5W3 355 aaPredicted RBP8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 TDRD6O60522 2096 aaKnown RBP8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 TNRC6AQ8NDV7 1962 aaKnown RBP8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 SVEP1Q4LDE5 3571 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 RNF212BA8MTL3 300 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 MKRN2OSH3BPM6 223 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 CASC3O15234 703 aaKnown RBP8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 NKX2-8O15522 239 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 EPB41L2O43491 1005 aaKnown RBP8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 ITGB3P05106 788 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 CYP3A4P08684 503 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 CSH1P0DML2 217 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 CSH2P0DML3 217 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 HAPLN1P10915 354 aaPredicted RBP8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 DGKAP23743 735 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 CDC20Q12834 499 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 TFDP1Q14186 410 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 EMC2Q15006 297 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 NADK2Q4G0N4 442 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 XKR4Q5GH76 650 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 NUGGCQ68CJ6 796 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 GRAMD4Q6IC98 578 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 DHX32Q7L7V1 743 aaKnown RBP8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 TEX2Q8IWB9 1127 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 RDM1Q8NG50 284 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 JPH3Q8WXH2 748 aaPredicted RBP8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 LENG9Q96B70 501 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 TRMT2BQ96GJ1 504 aaKnown RBP8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 MYRFLQ96LU7 910 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 SMR3AQ99954 134 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 TRIM9Q9C026 710 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 SLKQ9H2G2 1235 aaPredicted RBP8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 CYLDQ9NQC7 956 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 EVA1BQ9NVM1 165 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 PISDQ9UG56 409 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 PPME1Q9Y570 386 aa8.01□□□□□ -1.13
EXOSC3-206ENST00000489414 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8□□□□□ -1.13
EXOSC3-206ENST00000489414 HIP1O00291 1037 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 DUX1O43812 170 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 ZG16O60844 167 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 F12P00748 615 aaPredicted RBP8□□□□□ -1.13
EXOSC3-206ENST00000489414 GRM5P41594 1212 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 ATP1A2P50993 1020 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 PDE6CP51160 858 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 PER3P56645 1201 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 YBX1P67809 324 aaKnown RBP8□□□□□ -1.13
EXOSC3-206ENST00000489414 ZNF177Q13360 481 aaPredicted RBP8□□□□□ -1.13
EXOSC3-206ENST00000489414 AP3B2Q13367 1082 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 ART3Q13508 389 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 DEFB109BQ30KR1 87 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 SLC39A12Q504Y0 691 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 CEP135Q66GS9 1140 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 ALKAL1Q6UXT8 129 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 B3GNT8Q7Z7M8 397 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 DSG4Q86SJ6 1040 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 USP37Q86T82 979 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 OR10T2Q8NGX3 314 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 GPBAR1Q8TDU6 330 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 NKD1Q969G9 470 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 HVCN1Q96D96 273 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 CEP170P1Q96L14 293 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 ZMAT2Q96NC0 199 aaKnown RBP8□□□□□ -1.13
EXOSC3-206ENST00000489414 ESYT1Q9BSJ8 1104 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 LHX5Q9H2C1 402 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 SGK2Q9HBY8 427 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 NLGN3Q9NZ94 848 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 CHMP5Q9NZZ3 219 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 ADAM21Q9UKJ8 722 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 PCDHGB6Q9Y5F9 930 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 PCDHA5Q9Y5H7 936 aa8□□□□□ -1.13
EXOSC3-206ENST00000489414 C10orf142B7Z368 130 aa7.99□□□□□ -1.13
EXOSC3-206ENST00000489414 C9orf172C9J069 976 aa7.99□□□□□ -1.13
EXOSC3-206ENST00000489414 K7ELQ4 463 aaPredicted RBP7.99□□□□□ -1.13
EXOSC3-206ENST00000489414 NOL4O94818 638 aa7.99□□□□□ -1.13
EXOSC3-206ENST00000489414 JMJD7P0C870 316 aa7.99□□□□□ -1.13
EXOSC3-206ENST00000489414 PRKAR1AP10644 381 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms