RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 C4orf50Q6ZRC1 276 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 TRIM46Q7Z4K8 759 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 TMPRSS6Q8IU80 811 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 ADGRF2Q8IZF7 708 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 TMEM86AQ8N2M4 240 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 EHBP1Q8NDI1 1231 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 ZNF248Q8NDW4 579 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 CNDP2Q96KP4 475 aaKnown RBP9.75□□□□□ -0.85
SSBP1-212ENST00000489378 NUP58Q9BVL2 599 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 C6orf106Q9H6K1 298 aaPredicted RBP9.75□□□□□ -0.85
SSBP1-212ENST00000489378 CRTAC1Q9NQ79 661 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 MAGEC2Q9UBF1 373 aaPredicted RBP9.75□□□□□ -0.85
SSBP1-212ENST00000489378 AGAP1Q9UPQ3 857 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 SH3BP1Q9Y3L3 701 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 MYH10P35580 1976 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 ANKRD17O75179 2603 aaKnown RBP9.75□□□□□ -0.85
SSBP1-212ENST00000489378 CREBBPQ92793 2442 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 F8VP50 259 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 PAPSS1O43252 624 aaPredicted RBP9.74□□□□□ -0.85
SSBP1-212ENST00000489378 ITGB3P05106 788 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 C1SP09871 688 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 CISD3P0C7P0 127 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 IRF1P10914 325 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 TYRP14679 529 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 LMO2P25791 158 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 ANXA13P27216 316 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 PCSK1P29120 753 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 PNPLA4P41247 253 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 NOP14P78316 857 aaKnown RBP9.74□□□□□ -0.85
SSBP1-212ENST00000489378 GUCY1B3Q02153 619 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 STARD3Q14849 445 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 TTC38Q5R3I4 469 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 BROXQ5VW32 411 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 NECAB1Q8N987 351 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 IGSF22Q8N9C0 903 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 TSC1Q92574 1164 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 KCNN1Q92952 543 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 SIPA1Q96FS4 1042 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 HIC2Q96JB3 615 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 SYT15Q9BQS2 421 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 MMTAG2Q9BU76 263 aaKnown RBP9.74□□□□□ -0.85
SSBP1-212ENST00000489378 BBS2Q9BXC9 721 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 OSGEPQ9NPF4 335 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 TMEM30AQ9NV96 361 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 ANKMY1Q9P2S6 941 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.74□□□□□ -0.85
SSBP1-212ENST00000489378 SNX9Q9Y5X1 595 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 CKAP5Q14008 2032 aa9.74□□□□□ -0.85
SSBP1-212ENST00000489378 USP9YO00507 2555 aaPredicted RBP9.74□□□□□ -0.85
SSBP1-212ENST00000489378 A0A1B0GTQ1 180 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 H0YCG3 227 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 JAK2O60674 1132 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 CDK4P11802 303 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 PLCG1P19174 1290 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 CDK11BP21127 795 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 GLDCP23378 1020 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 ACSL1P33121 698 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 LHX1P48742 406 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 COPAP53621 1224 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 CACNA2D1P54289 1103 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 UCNP55089 124 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 PCBP4P57723 403 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 CYP27A1Q02318 531 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 IFRD2Q12894 506 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 ORC2Q13416 577 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 SHBQ15464 509 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 ZRSR1Q15695 479 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 IL17AQ16552 155 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 SOWAHAQ2M3V2 549 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 KIAA1614Q5VZ46 1190 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 KRT79Q5XKE5 535 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 ADALQ6DHV7 355 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 CRELD2Q6UXH1 353 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 C1orf127Q8N9H9 656 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 CXorf38Q8TB03 319 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 PRR7Q8TB68 274 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 PRCCQ92733 491 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 P2RY11Q96G91 374 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 CEP295NLQ96MC4 621 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 XPO6Q96QU8 1125 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 TM6SF1Q9BZW5 370 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 PCED1AQ9H1Q7 454 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 IKZF4Q9H2S9 585 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 BSNQ9UPA5 3926 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 K7ENM7 598 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 LAD1O00515 517 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 GREM1O60565 184 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 DGKGP49619 791 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 SLC12A3P55017 1021 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 TFAMQ00059 246 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 VAC14Q08AM6 782 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 NFATC3Q12968 1075 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 TRIM29Q14134 588 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 ARSHQ5FYA8 562 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 TDRD10Q5VZ19 366 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 DESI1Q6ICB0 168 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 TPGS1Q6ZTW0 290 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 EID2Q8N6I1 236 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 TOP6BLQ8N6T0 577 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms