RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ARHGEF19Q8IW93 802 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 UBA3Q8TBC4 463 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 SPACA7Q96KW9 195 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 CLSTN2Q9H4D0 955 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 DLL3Q9NYJ7 618 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 DACH1Q9UI36 760 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 STARD13Q9Y3M8 1113 aa14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 HBS1LQ9Y450 684 aaKnown RBP14.46□□□□□ -0.09
SPTLC1-207ENST00000488921 SLC12A8A0AV02 714 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 SGK1O00141 431 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 CYBBP04839 570 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 HMBSP08397 361 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 LCP1P13796 627 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 BRD2P25440 801 aaKnown RBP14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 DGKGP49619 791 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 ZNF132P52740 706 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 DAOAP59103 153 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 PLK5Q496M5 336 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 SDE2Q6IQ49 451 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 TMEM92Q6UXU6 159 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 BHLHA9Q7RTU4 235 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 DGLUCYQ7Z3D6 616 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 SFTPA1Q8IWL2 248 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 CPXM2Q8N436 756 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 MDGA1Q8NFP4 955 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 NETO1Q8TDF5 533 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 SLC35F5Q8WV83 523 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 IRGQQ8WZA9 623 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 TFAP2BQ92481 460 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 GOLGA1Q92805 767 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 KAT5Q92993 513 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 HSFY1Q96LI6 401 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 GBP4Q96PP9 640 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 TPSD1Q9BZJ3 242 aa14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 BCCIPQ9P287 314 aaKnown RBP eCLIP14.45□□□□□ -0.1
SPTLC1-207ENST00000488921 YJEFN3A6XGL0 299 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 E7ENQ6 273 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 RNF225M0QZC1 329 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 MED7O43513 233 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 FBXO21O94952 628 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 CHRM1P11229 460 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 KRT5P13647 590 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 NTSR1P30989 418 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 GBP1P32455 592 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 HARS2P49590 506 aaKnown RBP14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 MFAP3P55082 362 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 ZNF445P59923 1031 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 BYSLQ13895 437 aaKnown RBP14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 E2F5Q15329 346 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 MEA1Q16626 185 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 EMC10Q5UCC4 262 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 BSPRYQ5W0U4 402 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 SMYD5Q6GMV2 418 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 GBP6Q6ZN66 633 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 CREBRFQ8IUR6 639 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 DENND1CQ8IV53 801 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 FMNL3Q8IVF7 1028 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 FAM114A1Q8IWE2 563 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 C12orf50Q8NA57 414 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 KREMEN1Q96MU8 473 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 NUP62CLQ9H1M0 184 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 ARRDC1-AS1Q9H2J1 176 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 AGO1Q9UL18 857 aaKnown RBP14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 CNTN6Q9UQ52 1028 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 CEP192Q8TEP8 1941 aa14.44□□□□□ -0.1
SPTLC1-207ENST00000488921 TNRC6BQ9UPQ9 1833 aaKnown RBP14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 TCRBV21S2A2A0A5A6 115 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 GTPBP10A4D1E9 387 aaKnown RBP14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 ZBTB24O43167 697 aaPredicted RBP14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 SART1O43290 800 aaKnown RBP14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 ADAM23O75077 832 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 LATS1O95835 1130 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 PENKP01210 267 aaPredicted RBP14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 KLKB1P03952 638 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 HOXB2P14652 356 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 MTIF2P46199 727 aaKnown RBP14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 RGS7P49802 495 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 TRIP4Q15650 581 aaPredicted RBP14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 FYB2Q5VWT5 728 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 PMF1Q6P1K2 205 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 MSANTD2Q6P1R3 559 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 TRIM65Q6PJ69 517 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 FAM217AQ8IXS0 508 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 CHPFQ8IZ52 775 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 BHMTQ93088 406 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 RTKNQ9BST9 563 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 TRIM62Q9BVG3 475 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 DUSP15Q9H1R2 295 aaPredicted RBP14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 THAP9Q9H5L6 903 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 UBE2TQ9NPD8 197 aaPredicted RBP14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 PLK2Q9NYY3 685 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 APEX2Q9UBZ4 518 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 SLC27A6Q9Y2P4 619 aa14.43□□□□□ -0.1
SPTLC1-207ENST00000488921 ANTXRLA6NF34 631 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 GOLGA6L22H0YM25 854 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 NPC1O15118 1278 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 TRIM24O15164 1050 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 LTFP02788 710 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 ZNF806P0C7X5 589 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms