RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, human

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-215	ENST00000488914	FPR3	P25089	353 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	ABCD1	P33897	745 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	RAB1A	P62820	205 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	SAFB	Q15424	915 aa	Known RBP eCLIP	5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	COBLL1	Q53SF7	1204 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	UNC5D	Q6UXZ4	953 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	TRIM72	Q6ZMU5	477 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	DPY19L3	Q6ZPD9	716 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	NGEF	Q8N5V2	710 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	C8orf58	Q8NAV2	365 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	RP9	Q8TA86	221 aa	Known RBP	5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	FCRL4	Q96PJ5	515 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	ASB2	Q96Q27	587 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	THAP7	Q9BT49	309 aa	Predicted RBP	5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	PLEKHA5	Q9HAU0	1116 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	CHCHD3	Q9NX63	227 aa	Known RBP	5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	PCSK1N	Q9UHG2	260 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	GTF3C4	Q9UKN8	822 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	ANKRD6	Q9Y2G4	727 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	MED16	Q9Y2X0	877 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	GPRASP1	Q5JY77	1395 aa		5.42	□□□□□ -1.54
CTNNB1-215	ENST00000488914	ZCCHC6	Q5VYS8	1495 aa	Known RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	APAF1	O14727	1248 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	AP1G1	O43747	822 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	EXOC3	O60645	756 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	ABLIM3	O94929	683 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	INMT	O95050	263 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	IPO7	O95373	1038 aa	Known RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	TPD52	P55327	224 aa	Predicted RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	CYP1B1	Q16678	543 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	IFIT1B	Q5T764	474 aa	Known RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	FAM180B	Q6P0A1	224 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	KIRREL2	Q6UWL6	708 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	CCBE1	Q6UXH8	406 aa	Predicted RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	CYP26C1	Q6V0L0	522 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	RTL10	Q7L3V2	364 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	GALNT5	Q7Z7M9	940 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	SLC15A4	Q8N697	577 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	DNAJC5G	Q8N7S2	189 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	LSMEM1	Q8N8F7	131 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	PPP1R35	Q8TAP8	253 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	DIS3L	Q8TF46	1054 aa	Known RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	C1GALT1C1	Q96EU7	318 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	ZMAT2	Q96NC0	199 aa	Known RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	NUP88	Q99567	741 aa	Predicted RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	MESP1	Q9BRJ9	268 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	NLRC4	Q9NPP4	1024 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	TBC1D22B	Q9NU19	505 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	BLOC1S4	Q9NUP1	217 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	STK26	Q9P289	416 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	CGN	Q9P2M7	1197 aa	Known RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	PHTF1	Q9UMS5	762 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	SHOC2	Q9UQ13	582 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914	KAT6A	Q92794	2004 aa		5.41	□□□□□ -1.54
CTNNB1-215	ENST00000488914		A0A088AWK7	358 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914		A0A1B0GVC2	190 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	OFD1	O75665	1012 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	KIAA0754	O94854	1291 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	TJP3	O95049	919 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	IGKV2-30	P06310	120 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	NPR1	P16066	1061 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	HOXD10	P28358	340 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	STIP1	P31948	543 aa	Known RBP	5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	PTGER1	P34995	402 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	PAPOLA	P51003	745 aa	Known RBP	5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	TPTE	P56180	551 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	FGL2	Q14314	439 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	DAZAP2	Q15038	168 aa	Predicted RBP	5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	PKN2	Q16513	984 aa	Known RBP	5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	SPATA1	Q5VX52	437 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	SLC9A4	Q6AI14	798 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	ABRAXAS1	Q6UWZ7	409 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	SLC15A3	Q8IY34	581 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	GALNT16	Q8N428	558 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	CCDC191	Q8NCU4	936 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	OR8H1	Q8NGG4	311 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	DENND1A	Q8TEH3	1009 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	TMEM171	Q8WVE6	324 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	SOCS4	Q8WXH5	440 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	MOGAT1	Q96PD6	335 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	PRSS22	Q9GZN4	317 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	RMI1	Q9H9A7	625 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	ATP6V0A4	Q9HBG4	840 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	HELLS	Q9NRZ9	838 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	NKIRAS2	Q9NYR9	191 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	GABRQ	Q9UN88	632 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	TBC1D30	Q9Y2I9	924 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	SNX14	Q9Y5W7	946 aa		5.4	□□□□□ -1.54
CTNNB1-215	ENST00000488914	TMEM233	B4DJY2	109 aa		5.39	□□□□□ -1.55
CTNNB1-215	ENST00000488914	PROB1	E7EW31	1015 aa		5.39	□□□□□ -1.55
CTNNB1-215	ENST00000488914		F5H423	210 aa	Predicted RBP	5.39	□□□□□ -1.55
CTNNB1-215	ENST00000488914	AP4M1	O00189	453 aa		5.39	□□□□□ -1.55
CTNNB1-215	ENST00000488914	MBD4	O95243	580 aa		5.39	□□□□□ -1.55
CTNNB1-215	ENST00000488914	MYB	P10242	640 aa		5.39	□□□□□ -1.55
CTNNB1-215	ENST00000488914	KCNA3	P22001	575 aa		5.39	□□□□□ -1.55
CTNNB1-215	ENST00000488914	HTR1B	P28222	390 aa		5.39	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms