RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 RAD23BP54727 409 aa27.29■■□□□ 1.96
RNF220-216ENST00000488865 RPL6Q02878 288 aaKnown RBP27.29■■□□□ 1.96
RNF220-216ENST00000488865 ARHGAP17Q68EM7 881 aa27.29■■□□□ 1.96
RNF220-216ENST00000488865 SMYD4Q8IYR2 804 aaPredicted RBP27.29■■□□□ 1.96
RNF220-216ENST00000488865 GON4LQ3T8J9 2241 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 GIPC1O14908 333 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 NDUFV2P19404 249 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 ITPKAP23677 461 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 SLC8A3P57103 927 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 RAB41Q5JT25 222 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 CEP76Q8TAP6 659 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 EEF2KMTQ96G04 330 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 RMND1Q9NWS8 449 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 PLK2Q9NYY3 685 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 SLC27A6Q9Y2P4 619 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 PI4KAP42356 2102 aa27.28■■□□□ 1.96
RNF220-216ENST00000488865 IGHV1OR15-9A0A0B4J2B8 117 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 PENKP01210 267 aaPredicted RBP27.27■■□□□ 1.96
RNF220-216ENST00000488865 ZNF252P-AS1Q0IIN9 211 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 EFEMP1Q12805 493 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 DUOXA1Q1HG43 343 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 KIAA1211LQ6NV74 962 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 PIGZQ86VD9 579 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 ANKRD52Q8NB46 1076 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 TATDN2Q93075 761 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 BHMTQ93088 406 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 ARID3AQ99856 593 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 RASAL2Q9UJF2 1139 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 CEP192Q8TEP8 1941 aa27.27■■□□□ 1.96
RNF220-216ENST00000488865 ENGP17813 658 aa27.26■■□□□ 1.95
RNF220-216ENST00000488865 UAP1L1Q3KQV9 507 aa27.26■■□□□ 1.95
RNF220-216ENST00000488865 COBLL1Q53SF7 1204 aa27.26■■□□□ 1.95
RNF220-216ENST00000488865 FYB2Q5VWT5 728 aa27.26■■□□□ 1.95
RNF220-216ENST00000488865 RABEPKQ7Z6M1 372 aa27.26■■□□□ 1.95
RNF220-216ENST00000488865 GDPD2Q9HCC8 539 aa27.26■■□□□ 1.95
RNF220-216ENST00000488865 CACNA2D2Q9NY47 1150 aa27.26■■□□□ 1.95
RNF220-216ENST00000488865 SLC6A14Q9UN76 642 aa27.26■■□□□ 1.95
RNF220-216ENST00000488865 COQ4Q9Y3A0 265 aa27.26■■□□□ 1.95
RNF220-216ENST00000488865 ATXN2Q99700 1313 aaKnown RBP27.25■■□□□ 1.95
RNF220-216ENST00000488865 NPC1O15118 1278 aa27.25■■□□□ 1.95
RNF220-216ENST00000488865 CORO1AP31146 461 aaKnown RBP27.25■■□□□ 1.95
RNF220-216ENST00000488865 PRCPP42785 496 aa27.25■■□□□ 1.95
RNF220-216ENST00000488865 ZNF33AQ06730 810 aa27.25■■□□□ 1.95
RNF220-216ENST00000488865 PNOCQ13519 176 aa27.25■■□□□ 1.95
RNF220-216ENST00000488865 P2RY11Q96G91 374 aa27.25■■□□□ 1.95
RNF220-216ENST00000488865 MARCH2Q9P0N8 246 aa27.25■■□□□ 1.95
RNF220-216ENST00000488865 STRIP2Q9ULQ0 834 aa27.25■■□□□ 1.95
RNF220-216ENST00000488865 USP24Q9UPU5 2620 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 ASCC3Q8N3C0 2202 aaKnown RBP27.24■■□□□ 1.95
RNF220-216ENST00000488865 SLC16A3O15427 465 aaKnown RBP27.24■■□□□ 1.95
RNF220-216ENST00000488865 CFIP05156 583 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 MAPK8P45983 427 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 ZNF132P52740 706 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 MFAP3P55082 362 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 YWHAGP61981 247 aaKnown RBP eCLIP27.24■■□□□ 1.95
RNF220-216ENST00000488865 FKBP3Q00688 224 aaKnown RBP27.24■■□□□ 1.95
RNF220-216ENST00000488865 CBWD6Q4V339 395 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 CBWD3Q5JTY5 395 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 CBWD5Q5RIA9 395 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 ZNF658Q5TYW1 1059 aaPredicted RBP27.24■■□□□ 1.95
RNF220-216ENST00000488865 PM20D1Q6GTS8 502 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 RSRC2Q7L4I2 434 aaKnown RBP27.24■■□□□ 1.95
RNF220-216ENST00000488865 ZC3H3Q8IXZ2 948 aaKnown RBP27.24■■□□□ 1.95
RNF220-216ENST00000488865 MRGPRX1Q96LB2 322 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 GSDMAQ96QA5 445 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 TSG101Q99816 390 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 AGO1Q9UL18 857 aaKnown RBP27.24■■□□□ 1.95
RNF220-216ENST00000488865 CYP8B1Q9UNU6 501 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 RAD54BQ9Y620 910 aa27.24■■□□□ 1.95
RNF220-216ENST00000488865 HMBSP08397 361 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 SERPINF2P08697 491 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 TKTL1P51854 596 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 E2F5Q15329 346 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 TCERG1LQ5VWI1 586 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 FMR1NBQ8N0W7 255 aaPredicted RBP27.23■■□□□ 1.95
RNF220-216ENST00000488865 CPXM2Q8N436 756 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 DEFB119Q8N690 84 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 CAPN10Q9HC96 672 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 STON1Q9Y6Q2 735 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 CEP295Q9C0D2 2601 aa27.23■■□□□ 1.95
RNF220-216ENST00000488865 FRYQ5TBA9 3013 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 UPK3BL1B0FP48 263 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 WASH3PC4AMC7 463 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 UPK3BL2E5RIL1 263 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 ZBED1O96006 694 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 CYBBP04839 570 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 BCAT1P54687 386 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 YWHAEP62258 255 aaKnown RBP27.22■■□□□ 1.95
RNF220-216ENST00000488865 GFPT1Q06210 699 aaPredicted RBP27.22■■□□□ 1.95
RNF220-216ENST00000488865 CUL2Q13617 745 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 DCAF17Q5H9S7 520 aaPredicted RBP27.22■■□□□ 1.95
RNF220-216ENST00000488865 METTL3Q86U44 580 aaKnown RBP27.22■■□□□ 1.95
RNF220-216ENST00000488865 DENND1CQ8IV53 801 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 SLC41A1Q8IVJ1 513 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 PLD4Q96BZ4 506 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 SLC32A1Q9H598 525 aa27.22■■□□□ 1.95
RNF220-216ENST00000488865 THAP10Q9P2Z0 257 aaPredicted RBP27.22■■□□□ 1.95
RNF220-216ENST00000488865 SLC12A8A0AV02 714 aa27.21■■□□□ 1.95
RNF220-216ENST00000488865 XPO1O14980 1071 aaKnown RBP27.21■■□□□ 1.95
RNF220-216ENST00000488865 ATXN3P54252 364 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms