RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 FZD5Q13467 585 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 ARID5BQ14865 1188 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 CLEC16AQ2KHT3 1053 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 SFMBT2Q5VUG0 894 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 SYPL2Q5VXT5 272 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 HGSNATQ68CP4 663 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 TOGARAM2Q6ZUX3 1019 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 PHF13Q86YI8 300 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-217ENST00000488801 VSTM4Q8IW00 320 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 CCDC105Q8IYK2 499 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 ADGRG2Q8IZP9 1017 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 CPA6Q8N4T0 437 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 CPA5Q8WXQ8 436 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 C18orf8Q96DM3 657 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 PDCL3Q9H2J4 239 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 DLGAP2Q9P1A6 1054 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 SFMBT1Q9UHJ3 866 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 STRIP2Q9ULQ0 834 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 NAALADL1Q9UQQ1 740 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 MAN2B1O00754 1011 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 MSI1O43347 362 aaKnown RBP19.47■□□□□ 0.71
PTCD3-217ENST00000488801 NCAM1P13591 858 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 TARSP26639 723 aaKnown RBP19.47■□□□□ 0.71
PTCD3-217ENST00000488801 GJA4P35212 333 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 VCPP55072 806 aaKnown RBP19.47■□□□□ 0.71
PTCD3-217ENST00000488801 ZBED6P86452 979 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 RING1Q06587 406 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 ASIC2Q16515 512 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 EFHC1Q5JVL4 640 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 OTUD1Q5VV17 481 aaPredicted RBP19.47■□□□□ 0.71
PTCD3-217ENST00000488801 ASTLQ6HA08 431 aaPredicted RBP19.47■□□□□ 0.71
PTCD3-217ENST00000488801 MON1BQ7L1V2 547 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 ERICH1Q86X53 443 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 RNF139Q8WU17 664 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 GOLGA1Q92805 767 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 FAM149B1Q96BN6 582 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 SLC39A13Q96H72 371 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 FOXQ1Q9C009 403 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 NUCKS1Q9H1E3 243 aaKnown RBP19.47■□□□□ 0.71
PTCD3-217ENST00000488801 STOML2Q9UJZ1 356 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 CKAP5Q14008 2032 aa19.47■□□□□ 0.71
PTCD3-217ENST00000488801 SLC12A8A0AV02 714 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 GFRA2O00451 464 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 IRAK2O43187 625 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 HNRNPH3P31942 346 aaKnown RBP19.46■□□□□ 0.71
PTCD3-217ENST00000488801 PITX1P78337 314 aaPredicted RBP19.46■□□□□ 0.71
PTCD3-217ENST00000488801 DHCR24Q15392 516 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 SPECC1LQ69YQ0 1117 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 OR6B2Q6IFH4 312 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 RHBDF2Q6PJF5 856 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 ZNF852Q6ZMS4 543 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 ARCQ7LC44 396 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 ZNF571Q7Z3V5 609 aaPredicted RBP19.46■□□□□ 0.71
PTCD3-217ENST00000488801 TAC4Q86UU9 113 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 TMEM105Q8N8V8 129 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 CLDN23Q96B33 292 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 DCLK3Q9C098 648 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 MFSD1Q9H3U5 465 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 HAUS4Q9H6D7 363 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 MARK1Q9P0L2 795 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 LSM7Q9UK45 103 aaKnown RBP19.46■□□□□ 0.71
PTCD3-217ENST00000488801 MTF2Q9Y483 593 aaPredicted RBP19.46■□□□□ 0.71
PTCD3-217ENST00000488801 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.46■□□□□ 0.713e-10■□□□□ 8.5
PTCD3-217ENST00000488801 WDFY4Q6ZS81 3184 aa19.46■□□□□ 0.71
PTCD3-217ENST00000488801 TCRBV5S1A1TA0A578 114 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 TRDMT1O14717 391 aaKnown RBP19.45■□□□□ 0.7
PTCD3-217ENST00000488801 HOXC11O43248 304 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-217ENST00000488801 LATS1O95835 1130 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 CD72P21854 359 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 CORO1AP31146 461 aaKnown RBP19.45■□□□□ 0.7
PTCD3-217ENST00000488801 OPRD1P41143 372 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 KPNA1P52294 538 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-217ENST00000488801 TRIM14Q14142 442 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 C2CD6Q53TS8 623 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 TRNP1Q6NT89 227 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 MMS22LQ6ZRQ5 1243 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 BNIPLQ7Z465 357 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 CPXM2Q8N436 756 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 MSANTD4Q8NCY6 345 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 TTC16Q8NEE8 873 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 TTC8Q8TAM2 541 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 FAM3CQ92520 227 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 NT5C3BQ969T7 300 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 P2RY11Q96G91 374 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 FCRL2Q96LA5 508 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-217ENST00000488801 SERPINB11Q96P15 392 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 ADAM33Q9BZ11 813 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 SYNCQ9H7C4 482 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 TMEM59LQ9UK28 342 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 ZNF510Q9Y2H8 683 aa19.45■□□□□ 0.7
PTCD3-217ENST00000488801 PI15O43692 258 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 CASP14P31944 242 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 CCINQ13939 588 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 TMEM196Q5HYL7 178 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 LY6G5CQ5SRR4 150 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 NAIF1Q69YI7 327 aaPredicted RBP19.44■□□□□ 0.7
PTCD3-217ENST00000488801 ETFBKMTQ8IXQ9 262 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 DEFB106AQ8N104 65 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 FLCNQ8NFG4 579 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 SLC30A5Q8TAD4 765 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms