RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 SPEM1Q8N4L4 309 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 PRSS33Q8NF86 280 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 EPS8L1Q8TE68 723 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 FAM122AQ96E09 287 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 PNKPQ96T60 521 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 BBS2Q9BXC9 721 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 TSPY26PQ9H489 355 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 SFMBT1Q9UHJ3 866 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 RAPGEFL1Q9UHV5 662 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 FBXO4Q9UKT5 387 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 COL4A2P08572 1712 aa13.46□□□□□ -0.25
PHF1-210ENST00000488767 KIF26AQ9ULI4 1882 aaPredicted RBP13.46□□□□□ -0.26
PHF1-210ENST00000488767 ZNF318Q5VUA4 2279 aa13.46□□□□□ -0.26
PHF1-210ENST00000488767 MUC6Q6W4X9 2439 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 A0A1B0GTH6 734 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 NEDD8-MDP1E9PL57 170 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 H0Y858 1186 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 PAPSS1O43252 624 aaPredicted RBP13.45□□□□□ -0.26
PHF1-210ENST00000488767 LATS1O95835 1130 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 GBP1P32455 592 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 NRLP54845 237 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 UBASH3AP57075 661 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 TBX4P57082 545 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 JAM2P57087 298 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 CDR2Q01850 454 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 ARID5AQ03989 594 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 MTAPQ13126 283 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 TRIP4Q15650 581 aaPredicted RBP13.45□□□□□ -0.26
PHF1-210ENST00000488767 LRSAM1Q6UWE0 723 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 TPGS1Q6ZTW0 290 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 NOP9Q86U38 636 aaKnown RBP13.45□□□□□ -0.26
PHF1-210ENST00000488767 DENND1CQ8IV53 801 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 CLEC4CQ8WTT0 213 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 CHFRQ96EP1 664 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 CPXM1Q96SM3 734 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 DDX50Q9BQ39 737 aaKnown RBP13.45□□□□□ -0.26
PHF1-210ENST00000488767 ARHGEF4Q9NR80 690 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 SEPT11Q9NVA2 429 aaKnown RBP13.45□□□□□ -0.26
PHF1-210ENST00000488767 ASNSD1Q9NWL6 643 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 SLC12A6Q9UHW9 1150 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 CYTH4Q9UIA0 394 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 MYO6Q9UM54 1294 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 F5P12259 2224 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 MIA3Q5JRA6 1907 aa13.45□□□□□ -0.26
PHF1-210ENST00000488767 TYW5A2RUC4 315 aaKnown RBP13.44□□□□□ -0.26
PHF1-210ENST00000488767 SHISA7A6NL88 538 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 EPHB6O15197 1021 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 APOEP02649 317 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 FERP16591 822 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 GRIA2P42262 883 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 CXCL12P48061 93 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 CDK17Q00537 523 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 FANCCQ00597 558 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 CSTF1Q05048 431 aaKnown RBP13.44□□□□□ -0.26
PHF1-210ENST00000488767 RING1Q06587 406 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 TCF15Q12870 199 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 MTA1Q13330 715 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 NNTQ13423 1086 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 FSTL4Q6MZW2 842 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 Q6ZNB5 142 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 TMEM25Q86YD3 366 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 ZNF687Q8N1G0 1237 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
PHF1-210ENST00000488767 RNF34Q969K3 372 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 ACDQ96AP0 544 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 C18orf8Q96DM3 657 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 IQCDQ96DY2 449 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 FAM126AQ9BYI3 521 aaPredicted RBP13.44□□□□□ -0.26
PHF1-210ENST00000488767 EDEM3Q9BZQ6 932 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 FAM204AQ9H8W3 233 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 RBM12Q9NTZ6 932 aaKnown RBP13.44□□□□□ -0.26
PHF1-210ENST00000488767 TMEM51Q9NW97 253 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 RRN3Q9NYV6 651 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 MARK1Q9P0L2 795 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 AGO1Q9UL18 857 aaKnown RBP13.44□□□□□ -0.26
PHF1-210ENST00000488767 TLR6Q9Y2C9 796 aa13.44□□□□□ -0.26
PHF1-210ENST00000488767 TBC1D3BA6NDS4 549 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 TEX33O43247 280 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 MSI1O43347 362 aaKnown RBP13.43□□□□□ -0.26
PHF1-210ENST00000488767 GREM1O60565 184 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 RNF40O75150 1001 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 GABBR2O75899 941 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 KAT7O95251 611 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 EGFP01133 1207 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 MMEP08473 750 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 SLC2A3P11169 496 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 TYRP14679 529 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 CDH5P33151 784 aaPredicted RBP13.43□□□□□ -0.26
PHF1-210ENST00000488767 NSFP46459 744 aaKnown RBP13.43□□□□□ -0.26
PHF1-210ENST00000488767 SLC6A3Q01959 620 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 FZD5Q13467 585 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 NR1I3Q14994 352 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 E2F5Q15329 346 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 ZNF528Q3MIS6 628 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 PTPN20Q4JDL3 420 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 DCAF6Q58WW2 860 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 FIGNQ5HY92 759 aa13.43□□□□□ -0.26
PHF1-210ENST00000488767 ADGRF1Q5T601 910 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms