RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 hCG_1642624A0A1W2PR95 340 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 J3KTA2 159 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 PSMD9O00233 223 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 DNPH1O43598 174 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 PMPCBO75439 489 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 PDE8BO95263 885 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 VIPP01282 170 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 ENGP17813 658 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 KLRK1P26718 216 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 CYP2C18P33260 490 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 HTR7P34969 479 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 SERPINF1P36955 418 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 PBX1P40424 430 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 E2F1Q01094 437 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 NSUN2Q08J23 767 aaKnown RBP eCLIP3.78□□□□□ -1.8
CD46-215ENST00000488596 ATP1A4Q13733 1029 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 GRM4Q14833 912 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 ZRSR2Q15696 482 aaKnown RBP3.78□□□□□ -1.8
CD46-215ENST00000488596 PDCD2Q16342 344 aaPredicted RBP3.78□□□□□ -1.8
CD46-215ENST00000488596 CYP1B1Q16678 543 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 SUPT20HL1Q3ZLR7 823 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 MORN5Q5VZ52 161 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 ARL6IP4Q66PJ3 421 aaKnown RBP3.78□□□□□ -1.8
CD46-215ENST00000488596 PARS2Q7L3T8 475 aaKnown RBP3.78□□□□□ -1.8
CD46-215ENST00000488596 KRT73Q86Y46 540 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 RASGRP3Q8IV61 690 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 FAM71BQ8TC56 605 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 CTHRC1Q96CG8 243 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 ZDHHC12Q96GR4 267 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 ZNF668Q96K58 619 aaPredicted RBP3.78□□□□□ -1.8
CD46-215ENST00000488596 PRR25Q96S07 402 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 RMDN3Q96TC7 470 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 HERPUD2Q9BSE4 406 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 MAGEH1Q9H213 219 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 DLL3Q9NYJ7 618 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 NKX1-2Q9UD57 310 aaPredicted RBP3.78□□□□□ -1.8
CD46-215ENST00000488596 ASAP1Q9ULH1 1129 aa3.78□□□□□ -1.8
CD46-215ENST00000488596 PNMA6EA0A0J9YXQ4 647 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 OR2W5A6NFC9 320 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 TISP43B9A030 160 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 ACKR2O00590 384 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 CES2O00748 559 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 FCHO1O14526 889 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 ZNF213O14771 459 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 PCDH17O14917 1159 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 CA12O43570 354 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 SPRY2O43597 315 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 TAF5LO75529 589 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 NTN1O95631 604 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 NTSR2O95665 410 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 ANXA6P08133 673 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 FAM163BP0C2L3 166 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 CYP2D6P10635 497 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 CREB1P16220 341 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 NPPBP16860 134 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 NDUFB7P17568 137 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 SFPQP23246 707 aaKnown RBP eCLIP3.77□□□□□ -1.81
CD46-215ENST00000488596 RBL1P28749 1068 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 GKP32189 559 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 DEUP1Q05D60 604 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 MTAPQ13126 283 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 TIGD6Q17RP2 521 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 P3H1Q32P28 736 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 PLAC9Q5JTB6 97 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 TEDDM1Q5T9Z0 273 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 SULT6B1Q6IMI4 303 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 GRHL2Q6ISB3 625 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 SLC18B1Q6NT16 456 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 JMJD6Q6NYC1 403 aaPredicted RBP3.77□□□□□ -1.81
CD46-215ENST00000488596 Q6ZWC4 215 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 ZNF551Q7Z340 670 aaPredicted RBP3.77□□□□□ -1.81
CD46-215ENST00000488596 CACNA2D3Q8IZS8 1091 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 NKAPQ8N5F7 415 aaKnown RBP3.77□□□□□ -1.81
CD46-215ENST00000488596 SPATA3Q8NHX4 192 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 MBD3L2Q8NHZ7 208 aaPredicted RBP3.77□□□□□ -1.81
CD46-215ENST00000488596 WDYHV1Q96HA8 205 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 PRR11Q96HE9 360 aaPredicted RBP3.77□□□□□ -1.81
CD46-215ENST00000488596 LENG8Q96PV6 779 aaPredicted RBP3.77□□□□□ -1.81
CD46-215ENST00000488596 MLXIPQ9HAP2 919 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 TMEM8AQ9HCN3 771 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 NRIP3Q9NQ35 241 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 FSCN3Q9NQT6 498 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 SH3BP4Q9P0V3 963 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 STEAP1Q9UHE8 339 aa3.77□□□□□ -1.81
CD46-215ENST00000488596 COL15A1P39059 1388 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 QSOX1O00391 747 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 SYT5O00445 386 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 PPP6CO00743 305 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 JTBO76095 146 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 WDR47O94967 919 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 NXPH3O95157 252 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 TOP3BO95985 862 aaKnown RBP3.76□□□□□ -1.81
CD46-215ENST00000488596 TMEM225BP0DP42 221 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 CD19P15391 556 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 DRD1P21728 446 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 CERS1P27544 350 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 SLC5A2P31639 672 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 MCM5P33992 734 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 GRK6P43250 576 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms