RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 KHNYNO15037 678 aaKnown RBP23.7■■□□□ 1.38
PTPN4-211ENST00000488279 HMBSP08397 361 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 ADRB1P08588 477 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 CISD3P0C7P0 127 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 VDRP11473 427 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 WASP42768 502 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 FMO5P49326 533 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 PDE4CQ08493 712 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 TOGARAM2Q6ZUX3 1019 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 LRRC4Q9HBW1 653 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 PLK2Q9NYY3 685 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 CD44P16070 742 aaKnown RBP23.69■■□□□ 1.38
PTPN4-211ENST00000488279 KCNA4P22459 653 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 CORO1AP31146 461 aaKnown RBP23.69■■□□□ 1.38
PTPN4-211ENST00000488279 BST2Q10589 180 aaKnown RBP23.69■■□□□ 1.38
PTPN4-211ENST00000488279 CETN1Q12798 172 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 MAP7D1Q3KQU3 841 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 CCDC40Q4G0X9 1142 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 SPDYCQ5MJ68 293 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 EGFLAMQ63HQ2 1017 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 KLHL10Q6JEL2 608 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 FRMD1Q8N878 549 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 IPO9Q96P70 1041 aaKnown RBP23.69■■□□□ 1.38
PTPN4-211ENST00000488279 EDEM2Q9BV94 578 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 ULBP1Q9BZM6 244 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 FBXO10Q9UK96 956 aa23.69■■□□□ 1.38
PTPN4-211ENST00000488279 AGO1Q9UL18 857 aaKnown RBP23.69■■□□□ 1.38
PTPN4-211ENST00000488279 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 A0A1W2PQF6 199 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 SLC12A8A0AV02 714 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 TULP2O00295 520 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 PMM2O15305 246 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 DENND1CQ8IV53 801 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 TMEFF1Q8IYR6 380 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 UBA3Q8TBC4 463 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 PIGKQ92643 395 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 ACOX2Q99424 681 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 MBD1Q9UIS9 605 aaPredicted RBP23.68■■□□□ 1.38
PTPN4-211ENST00000488279 ABCA7Q8IZY2 2146 aa23.68■■□□□ 1.38
PTPN4-211ENST00000488279 BICDL2A1A5D9 508 aa23.67■■□□□ 1.38
PTPN4-211ENST00000488279 PENKP01210 267 aaPredicted RBP23.67■■□□□ 1.38
PTPN4-211ENST00000488279 GABRG2P18507 467 aa23.67■■□□□ 1.38
PTPN4-211ENST00000488279 TMEM270Q6UE05 265 aa23.67■■□□□ 1.38
PTPN4-211ENST00000488279 UBR7Q8N806 425 aa23.67■■□□□ 1.38
PTPN4-211ENST00000488279 NDRG1Q92597 394 aaKnown RBP23.67■■□□□ 1.38
PTPN4-211ENST00000488279 NT5C1BQ96P26 610 aa23.67■■□□□ 1.38
PTPN4-211ENST00000488279 LSM14BQ9BX40 385 aaKnown RBP23.67■■□□□ 1.38
PTPN4-211ENST00000488279 OLA1Q9NTK5 396 aaKnown RBP23.67■■□□□ 1.38
PTPN4-211ENST00000488279 LNP1A1A4G5 178 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 PPP1R3GB7ZBB8 358 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 O00370 1275 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 CYBBP04839 570 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 PAEPP09466 180 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 SETSIPP0DME0 302 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 ADIGQ0VDE8 80 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 FYB2Q5VWT5 728 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 TTI2Q6NXR4 508 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 FOXR2Q6PJQ5 311 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 SIX6OS1Q8N1H7 587 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 IPO4Q8TEX9 1081 aaKnown RBP23.66■■□□□ 1.38
PTPN4-211ENST00000488279 RNF139Q8WU17 664 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 NELFBQ8WX92 580 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 KCTD13Q8WZ19 329 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 PLD4Q96BZ4 506 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 GABRG3Q99928 467 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 CALCOCO1Q9P1Z2 691 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 SLC27A6Q9Y2P4 619 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 PCDHB4Q9Y5E5 795 aa23.66■■□□□ 1.38
PTPN4-211ENST00000488279 C4orf47A7E2U8 309 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 GFRA2O00451 464 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 P4HA2O15460 535 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 ZNF217O75362 1048 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 BMP6P22004 513 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 PTGER3P43115 390 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 HARS2P49590 506 aaKnown RBP23.65■■□□□ 1.38
PTPN4-211ENST00000488279 BSPRYQ5W0U4 402 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 LCLAT1Q6UWP7 414 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 SLC36A4Q6YBV0 504 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 ARMCX6Q7L4S7 300 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 BHLHA9Q7RTU4 235 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 PPM1KQ8N3J5 372 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 P2RY11Q96G91 374 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 CACNA2D2Q9NY47 1150 aa23.65■■□□□ 1.38
PTPN4-211ENST00000488279 PATE3B3GLJ2 98 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 AP5Z1O43299 807 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 DPP6P42658 865 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 IRX4P78413 519 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 MORC3Q14149 939 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 TRIP4Q15650 581 aaPredicted RBP23.64■■□□□ 1.37
PTPN4-211ENST00000488279 DAB2IPQ5VWQ8 1189 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 KIAA1211LQ6NV74 962 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 SYT12Q8IV01 421 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 FMNL3Q8IVF7 1028 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 CPXM2Q8N436 756 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 DDI1Q8WTU0 396 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 CNGB3Q9NQW8 809 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 ABCC13Q9NSE7 274 aa23.64■■□□□ 1.37
PTPN4-211ENST00000488279 MYO18AQ92614 2054 aaKnown RBP23.64■■□□□ 1.37
PTPN4-211ENST00000488279 YJEFN3A6XGL0 299 aa23.63■■□□□ 1.37
PTPN4-211ENST00000488279 E7ENQ6 273 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms