RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ZNF510Q9Y2H8 683 aa20.27■□□□□ 0.84
CD55-209ENST00000488171 BIN1O00499 593 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 CAVIN2O95810 425 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 HMBSP08397 361 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 NTSR1P30989 418 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 CORO1AP31146 461 aaKnown RBP20.26■□□□□ 0.83
CD55-209ENST00000488171 DGKGP49619 791 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 PKDCCQ504Y2 493 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 FRMD1Q8N878 549 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 UBA3Q8TBC4 463 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 TFAP2BQ92481 460 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 NT5C1BQ96P26 610 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 ACOX2Q99424 681 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 BCCIPQ9P287 314 aaKnown RBP eCLIP20.26■□□□□ 0.83
CD55-209ENST00000488171 MBD1Q9UIS9 605 aaPredicted RBP20.26■□□□□ 0.83
CD55-209ENST00000488171 FBXO10Q9UK96 956 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 KIAA1257Q9ULG3 409 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 THADAQ6YHU6 1953 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 ABCA7Q8IZY2 2146 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 MYO18AQ92614 2054 aaKnown RBP20.26■□□□□ 0.83
CD55-209ENST00000488171 PLXND1Q9Y4D7 1925 aa20.26■□□□□ 0.83
CD55-209ENST00000488171 A0A1W2PQF6 199 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 BICDL2A1A5D9 508 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 TM4SF5O14894 197 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 PENKP01210 267 aaPredicted RBP20.25■□□□□ 0.83
CD55-209ENST00000488171 HOXB2P14652 356 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 WASP42768 502 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 ADIGQ0VDE8 80 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 MAP7D1Q3KQU3 841 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 FYB2Q5VWT5 728 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 TMEM270Q6UE05 265 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 RSRC2Q7L4I2 434 aaKnown RBP20.25■□□□□ 0.83
CD55-209ENST00000488171 KAT5Q92993 513 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 DCLK3Q9C098 648 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 LRRC4Q9HBW1 653 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 CD248Q9HCU0 757 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 AGO1Q9UL18 857 aaKnown RBP20.25■□□□□ 0.83
CD55-209ENST00000488171 NUP205Q92621 2012 aa20.25■□□□□ 0.83
CD55-209ENST00000488171 SLC12A8A0AV02 714 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 RNF225M0QZC1 329 aaPredicted RBP20.24■□□□□ 0.83
CD55-209ENST00000488171 P4HA2O15460 535 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 PAEPP09466 180 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 SETSIPP0DME0 302 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 GABRG2P18507 467 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 CHKAP35790 457 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 PPM1JQ5JR12 505 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 STPG1Q5TH74 334 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 LCLAT1Q6UWP7 414 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 DENND1CQ8IV53 801 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 TRIM59Q8IWR1 403 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 PPM1KQ8N3J5 372 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 KCTD13Q8WZ19 329 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 SPACA7Q96KW9 195 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 ZSWIM1Q9BR11 485 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 STRIP2Q9ULQ0 834 aa20.24■□□□□ 0.83
CD55-209ENST00000488171 GABBR2O75899 941 aa20.23■□□□□ 0.83
CD55-209ENST00000488171 STX17P56962 302 aa20.23■□□□□ 0.83
CD55-209ENST00000488171 ARHGEF19Q8IW93 802 aa20.23■□□□□ 0.83
CD55-209ENST00000488171 CHPFQ8IZ52 775 aa20.23■□□□□ 0.83
CD55-209ENST00000488171 PGBD3Q8N328 593 aa20.23■□□□□ 0.83
CD55-209ENST00000488171 GABRG3Q99928 467 aa20.23■□□□□ 0.83
CD55-209ENST00000488171 CIZ1Q9ULV3 898 aaPredicted RBP20.23■□□□□ 0.83
CD55-209ENST00000488171 SLC27A6Q9Y2P4 619 aa20.23■□□□□ 0.83
CD55-209ENST00000488171 PCDHB4Q9Y5E5 795 aa20.23■□□□□ 0.83
CD55-209ENST00000488171 TNRC6BQ9UPQ9 1833 aaKnown RBP20.23■□□□□ 0.83
CD55-209ENST00000488171 LAMA1P25391 3075 aa20.23■□□□□ 0.83
CD55-209ENST00000488171 YJEFN3A6XGL0 299 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 E7ENQ6 273 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 DHPSP49366 369 aaPredicted RBP20.22■□□□□ 0.83
CD55-209ENST00000488171 MARSP56192 900 aaKnown RBP20.22■□□□□ 0.83
CD55-209ENST00000488171 PAK1Q13153 545 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 TRIP4Q15650 581 aaPredicted RBP20.22■□□□□ 0.83
CD55-209ENST00000488171 BSPRYQ5W0U4 402 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 IL31Q6EBC2 164 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 KIAA1211LQ6NV74 962 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 CYP2U1Q7Z449 544 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 FAM217AQ8IXS0 508 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 SCML4Q8N228 414 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 CPXM2Q8N436 756 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 SLC35F5Q8WV83 523 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 PLD4Q96BZ4 506 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 IPO9Q96P70 1041 aaKnown RBP20.22■□□□□ 0.83
CD55-209ENST00000488171 OLA1Q9NTK5 396 aaKnown RBP20.22■□□□□ 0.83
CD55-209ENST00000488171 CALCOCO1Q9P1Z2 691 aa20.22■□□□□ 0.83
CD55-209ENST00000488171 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.22■□□□□ 0.83
CD55-209ENST00000488171 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 CALCAP01258 141 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 BRD2P25440 801 aaKnown RBP20.21■□□□□ 0.83
CD55-209ENST00000488171 ZNF132P52740 706 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 MFAP3P55082 362 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 DAOAP59103 153 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 CETN1Q12798 172 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 KCNH2Q12809 1159 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 CNGA2Q16280 664 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 PMF1Q6P1K2 205 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 RRAGAQ7L523 313 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 LPCAT2Q7L5N7 544 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 FMNL3Q8IVF7 1028 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 TMEFF1Q8IYR6 380 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 SIX6OS1Q8N1H7 587 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms