RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ZBTB40Q9NUA8 1239 aa4.73□□□□□ -1.65
CCDC66-221ENST00000487739 SEMA5BQ9P283 1151 aa4.73□□□□□ -1.65
CCDC66-221ENST00000487739 LRP12Q9Y561 859 aa4.73□□□□□ -1.65
CCDC66-221ENST00000487739 C2CD4BA6NLJ0 364 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 RRHO14718 337 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 WDR47O94967 919 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 ZBED1O96006 694 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 MT-ND5P03915 603 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 HRGP04196 525 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 PEX2P28328 305 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 SLC12A2P55011 1212 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 DNASE1L3Q13609 305 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 NFE2Q16621 373 aaPredicted RBP4.72□□□□□ -1.65
CCDC66-221ENST00000487739 GRHL2Q6ISB3 625 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 FAM177A1Q8N128 213 aaPredicted RBP4.72□□□□□ -1.65
CCDC66-221ENST00000487739 ACRBPQ8NEB7 543 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 BCAS4Q8TDM0 211 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 WIPF2Q8TF74 440 aaPredicted RBP4.72□□□□□ -1.65
CCDC66-221ENST00000487739 TRMT61AQ96FX7 289 aaKnown RBP4.72□□□□□ -1.65
CCDC66-221ENST00000487739 SNX22Q96L94 193 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 FAM227BQ96M60 508 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 SCNM1Q9BWG6 230 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 SEMA4BQ9NPR2 832 aaPredicted RBP4.72□□□□□ -1.65
CCDC66-221ENST00000487739 TMEM45AQ9NWC5 275 aa4.72□□□□□ -1.65
CCDC66-221ENST00000487739 TTBK1Q5TCY1 1321 aaPredicted RBP4.72□□□□□ -1.65
CCDC66-221ENST00000487739 IGLV5-39A0A0G2JS06 123 aa4.71□□□□□ -1.66
CCDC66-221ENST00000487739 TPP1O14773 563 aa4.71□□□□□ -1.66
CCDC66-221ENST00000487739 MBPP02686 304 aaPredicted RBP4.71□□□□□ -1.66
CCDC66-221ENST00000487739 RPL17P18621 184 aaKnown RBP4.71□□□□□ -1.66
CCDC66-221ENST00000487739 DGKQP52824 942 aa4.71□□□□□ -1.66
CCDC66-221ENST00000487739 RAE1P78406 368 aaKnown RBP4.71□□□□□ -1.66
CCDC66-221ENST00000487739 EARS2Q5JPH6 523 aaKnown RBP4.71□□□□□ -1.66
CCDC66-221ENST00000487739 FAM57BQ71RH2 274 aa4.71□□□□□ -1.66
CCDC66-221ENST00000487739 PIGKQ92643 395 aa4.71□□□□□ -1.66
CCDC66-221ENST00000487739 NLRP4Q96MN2 994 aa4.71□□□□□ -1.66
CCDC66-221ENST00000487739 RNF26Q9BY78 433 aaPredicted RBP4.71□□□□□ -1.66
CCDC66-221ENST00000487739 SLC25A32Q9H2D1 315 aa4.71□□□□□ -1.66
CCDC66-221ENST00000487739 SAP30LQ9HAJ7 183 aa4.71□□□□□ -1.66
CCDC66-221ENST00000487739 DDX20Q9UHI6 824 aaKnown RBP4.71□□□□□ -1.66
CCDC66-221ENST00000487739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.7□□□□□ -1.66
CCDC66-221ENST00000487739 F8W810 466 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 FOXN3O00409 490 aaPredicted RBP4.7□□□□□ -1.66
CCDC66-221ENST00000487739 SMAD6O43541 496 aaKnown RBP4.7□□□□□ -1.66
CCDC66-221ENST00000487739 S100BP04271 92 aaPredicted RBP4.7□□□□□ -1.66
CCDC66-221ENST00000487739 RPS6KB1P23443 525 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 YY1P25490 414 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 IL6STP40189 918 aaPredicted RBP4.7□□□□□ -1.66
CCDC66-221ENST00000487739 MTAPQ13126 283 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 ERV3-1Q14264 604 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 ACOX1Q15067 660 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 CNGA3Q16281 694 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 PLEKHG6Q3KR16 790 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 MANEAQ5SRI9 462 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 ZNF549Q6P9A3 640 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 CHST15Q7LFX5 561 aaPredicted RBP4.7□□□□□ -1.66
CCDC66-221ENST00000487739 TFAP2DQ7Z6R9 452 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 SKAP1Q86WV1 359 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 P2RY11Q96G91 374 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 TUBB6Q9BUF5 446 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 BTBD1Q9H0C5 482 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 HIPK2Q9H2X6 1198 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 AGO4Q9HCK5 861 aaKnown RBP4.7□□□□□ -1.66
CCDC66-221ENST00000487739 HEYLQ9NQ87 328 aaPredicted RBP4.7□□□□□ -1.66
CCDC66-221ENST00000487739 TBC1D23Q9NUY8 699 aa4.7□□□□□ -1.66
CCDC66-221ENST00000487739 SIRT4Q9Y6E7 314 aaPredicted RBP4.7□□□□□ -1.66
CCDC66-221ENST00000487739 SLC22A23A1A5C7 686 aa4.69□□□□□ -1.66
CCDC66-221ENST00000487739 SYF2O95926 243 aaKnown RBP4.69□□□□□ -1.66
CCDC66-221ENST00000487739 ANXA2P07355 339 aaKnown RBP4.69□□□□□ -1.66
CCDC66-221ENST00000487739 TNFRSF1BP20333 461 aa4.69□□□□□ -1.66
CCDC66-221ENST00000487739 HOXA7P31268 230 aaPredicted RBP4.69□□□□□ -1.66
CCDC66-221ENST00000487739 MTA1Q13330 715 aa4.69□□□□□ -1.66
CCDC66-221ENST00000487739 AASDHQ4L235 1098 aaPredicted RBP4.69□□□□□ -1.66
CCDC66-221ENST00000487739 RBM44Q6ZP01 1051 aaKnown RBP4.69□□□□□ -1.66
CCDC66-221ENST00000487739 RNF44Q7L0R7 432 aa4.69□□□□□ -1.66
CCDC66-221ENST00000487739 UEVLDQ8IX04 471 aa4.69□□□□□ -1.66
CCDC66-221ENST00000487739 SUN3Q8TAQ9 357 aa4.69□□□□□ -1.66
CCDC66-221ENST00000487739 PRR11Q96HE9 360 aaPredicted RBP4.69□□□□□ -1.66
CCDC66-221ENST00000487739 THOC3Q96J01 351 aaKnown RBP4.69□□□□□ -1.66
CCDC66-221ENST00000487739 STRBPQ96SI9 672 aaKnown RBP4.69□□□□□ -1.66
CCDC66-221ENST00000487739 TMEM8AQ9HCN3 771 aa4.69□□□□□ -1.66
CCDC66-221ENST00000487739 MLXIPLQ9NP71 852 aa4.69□□□□□ -1.66
CCDC66-221ENST00000487739 HEMK1Q9Y5R4 338 aaPredicted RBP4.69□□□□□ -1.66
CCDC66-221ENST00000487739 EID1Q9Y6B2 187 aa4.69□□□□□ -1.66
CCDC66-221ENST00000487739 TTC34A8MYJ7 566 aa4.68□□□□□ -1.66
CCDC66-221ENST00000487739 PRR23D1E9PI22 279 aaPredicted RBP4.68□□□□□ -1.66
CCDC66-221ENST00000487739 SLC3A2P08195 630 aaKnown RBP4.68□□□□□ -1.66
CCDC66-221ENST00000487739 PRR23D2P0DMB1 279 aaPredicted RBP4.68□□□□□ -1.66
CCDC66-221ENST00000487739 T-ENOLP0DO92 83 aa4.68□□□□□ -1.66
CCDC66-221ENST00000487739 TFEBP19484 476 aa4.68□□□□□ -1.66
CCDC66-221ENST00000487739 DUSP1P28562 367 aa4.68□□□□□ -1.66
CCDC66-221ENST00000487739 CDKN2AP42771 156 aaKnown RBP4.68□□□□□ -1.66
CCDC66-221ENST00000487739 ALDH7A1P49419 539 aaKnown RBP4.68□□□□□ -1.66
CCDC66-221ENST00000487739 VPS41P49754 854 aa4.68□□□□□ -1.66
CCDC66-221ENST00000487739 PELI3Q8N2H9 469 aa4.68□□□□□ -1.66
CCDC66-221ENST00000487739 SLC25A28Q96A46 364 aa4.68□□□□□ -1.66
CCDC66-221ENST00000487739 SENP7Q9BQF6 1050 aa4.68□□□□□ -1.66
CCDC66-221ENST00000487739 PAPOLBQ9NRJ5 636 aaKnown RBP4.68□□□□□ -1.66
CCDC66-221ENST00000487739 DECR2Q9NUI1 292 aa4.68□□□□□ -1.66
CCDC66-221ENST00000487739 ABHD10Q9NUJ1 306 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms