RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 GJB4Q9NTQ9 266 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 DACT1Q9NYF0 836 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 TFCP2L1Q9NZI6 479 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 EXOC5O00471 708 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 NPHP1O15259 732 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 TMPRSS11DO60235 418 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 LATS1O95835 1130 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 IL6RP08887 468 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 CYP2D6P10635 497 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 GSTM5P46439 218 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 CCT5P48643 541 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 CCT8P50990 548 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 HNRNPMP52272 730 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 POLGP54098 1239 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 FOXG1P55316 489 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 TIRAPP58753 221 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 EIF4A1P60842 406 aaKnown RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 ATP1A4Q13733 1029 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 CBFBQ13951 182 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 CSHL1Q14406 222 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 SPARCL1Q14515 664 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 DHX8Q14562 1220 aaKnown RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 PFKFB4Q16877 469 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 PTCHD3Q3KNS1 767 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 HSP90AB4PQ58FF6 505 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 ATPAF1Q5TC12 328 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 KLHL17Q6TDP4 642 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 CLEC9AQ6UXN8 241 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 P3H2Q8IVL5 708 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 NRSN1Q8IZ57 195 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 ABHD11Q8NFV4 315 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 FAM71BQ8TC56 605 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 IPO4Q8TEX9 1081 aaKnown RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 TRAPPC12Q8WVT3 735 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 NUDT22Q9BRQ3 303 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 CINPQ9BW66 212 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 QTRT1Q9BXR0 403 aaKnown RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 AGO4Q9HCK5 861 aaKnown RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 ELOVL5Q9NYP7 299 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 MORC2Q9Y6X9 1032 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 ADGRA2Q96PE1 1338 aa4.35□□□□□ -1.71
HMGB1P36-201ENST00000487709 A8MVJ9 347 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 TARM1B6A8C7 271 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 PPEF2O14830 753 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 PIP5K1BO14986 540 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 IRAK2O43187 625 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 PDHA1P08559 390 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 TMEM225BP0DP42 221 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 NPPBP16860 134 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 YY1P25490 414 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 CERS1P27544 350 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 TXNL4AP83876 142 aaKnown RBP4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 RAPGEF1Q13905 1077 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 PRKG1Q13976 671 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 PTK2BQ14289 1009 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZNF260Q3ZCT1 412 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 ARHGAP15Q53QZ3 475 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 SLC18B1Q6NT16 456 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 ANKRD16Q6P6B7 361 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 CCDC174Q6PII3 467 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 KIAA0408Q6ZU52 694 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 PARS2Q7L3T8 475 aaKnown RBP4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 SLC29A4Q7RTT9 530 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 MAVSQ7Z434 540 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZNF354CQ86Y25 554 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 CPXCR1Q8N123 301 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 ATG16L2Q8NAA4 619 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 SPATA3Q8NHX4 192 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 RUBCNQ92622 972 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 SPRTNQ9H040 489 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 PTPRHQ9HD43 1115 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 OBP2BQ9NPH6 170 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 SH3BP4Q9P0V3 963 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 HERC5Q9UII4 1024 aaKnown RBP4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 AMFRQ9UKV5 643 aa4.34□□□□□ -1.71
HMGB1P36-201ENST00000487709 A0A087WZ62 844 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 PNMA6EA0A0J9YXQ4 647 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 WDR27A2RRH5 827 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 LGALS16A8MUM7 142 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 H3BNC9 293 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 CES2O00748 559 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 ASNA1O43681 348 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 NBNO60934 754 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 WDR47O94967 919 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 TOP3BO95985 862 aaKnown RBP4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 SLC3A2P08195 630 aaKnown RBP4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 MYCLP12524 364 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 CREB1P16220 341 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 PECAM1P16284 738 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 CYP2C18P33260 490 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 BIRC3Q13489 604 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 TRIM71Q2Q1W2 868 aaKnown RBP4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 CEP78Q5JTW2 689 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 RAP1GAP2Q684P5 730 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 ABLIM2Q6H8Q1 611 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 ERAP2Q6P179 960 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 KRT27Q7Z3Y8 459 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 CCDC117Q8IWD4 279 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 MYCT1Q8N699 235 aa4.33□□□□□ -1.72
HMGB1P36-201ENST00000487709 PPM1EQ8WY54 764 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms