RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 TNFRSF1BP20333 461 aa4.31□□□□□ -1.72
RBM39-234ENST00000487604 JAK3P52333 1124 aa4.31□□□□□ -1.72
RBM39-234ENST00000487604 WDR5P61964 334 aaKnown RBP4.31□□□□□ -1.72
RBM39-234ENST00000487604 GRM3Q14832 879 aa4.31□□□□□ -1.72
RBM39-234ENST00000487604 GPR162Q16538 588 aa4.31□□□□□ -1.72
RBM39-234ENST00000487604 TFAP2DQ7Z6R9 452 aa4.31□□□□□ -1.72
RBM39-234ENST00000487604 SDR16C5Q8N3Y7 309 aa4.31□□□□□ -1.72
RBM39-234ENST00000487604 FSTL5Q8N475 847 aaPredicted RBP4.31□□□□□ -1.72
RBM39-234ENST00000487604 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.31□□□□□ -1.72
RBM39-234ENST00000487604 MBD3L2Q8NHZ7 208 aaPredicted RBP4.31□□□□□ -1.72
RBM39-234ENST00000487604 IPCEF1Q8WWN9 437 aaPredicted RBP4.31□□□□□ -1.72
RBM39-234ENST00000487604 TRMT61AQ96FX7 289 aaKnown RBP4.31□□□□□ -1.72
RBM39-234ENST00000487604 SCNM1Q9BWG6 230 aa4.31□□□□□ -1.72
RBM39-234ENST00000487604 ZBTB40Q9NUA8 1239 aa4.31□□□□□ -1.72
RBM39-234ENST00000487604 ZNF212Q9UDV6 495 aa4.31□□□□□ -1.72
RBM39-234ENST00000487604 TTC3P53804 2025 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 B4DGG1 531 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 MGEA5O60502 916 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 PEX2P28328 305 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 HOXA7P31268 230 aaPredicted RBP4.3□□□□□ -1.72
RBM39-234ENST00000487604 HTR6P50406 440 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 RAE1P78406 368 aaKnown RBP4.3□□□□□ -1.72
RBM39-234ENST00000487604 B4GALNT1Q00973 533 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 ACOX1Q15067 660 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 AASDHQ4L235 1098 aaPredicted RBP4.3□□□□□ -1.72
RBM39-234ENST00000487604 KIAA1161Q6NSJ0 714 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 LYZL4Q96KX0 146 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 FCRL5Q96RD9 977 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 STRBPQ96SI9 672 aaKnown RBP4.3□□□□□ -1.72
RBM39-234ENST00000487604 GATA5Q9BWX5 397 aaPredicted RBP4.3□□□□□ -1.72
RBM39-234ENST00000487604 ZCWPW1Q9H0M4 648 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 FAM234AQ9H0X4 552 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 SEMA4BQ9NPR2 832 aaPredicted RBP4.3□□□□□ -1.72
RBM39-234ENST00000487604 TBC1D23Q9NUY8 699 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 TMEM45AQ9NWC5 275 aa4.3□□□□□ -1.72
RBM39-234ENST00000487604 SIRT4Q9Y6E7 314 aaPredicted RBP4.3□□□□□ -1.72
RBM39-234ENST00000487604 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.29□□□□□ -1.72
RBM39-234ENST00000487604 SMAD6O43541 496 aaKnown RBP4.29□□□□□ -1.72
RBM39-234ENST00000487604 WDR47O94967 919 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 YY1P25490 414 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 IDUAP35475 653 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 FAM193AP78312 1265 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 CYB5RLQ6IPT4 315 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 ZNF793Q6ZN11 406 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 RNF44Q7L0R7 432 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 P3H2Q8IVL5 708 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 PELI3Q8N2H9 469 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 ACRBPQ8NEB7 543 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 SUN3Q8TAQ9 357 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 BCAS4Q8TDM0 211 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 P2RY11Q96G91 374 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 ARL8BQ9NVJ2 186 aa4.29□□□□□ -1.72
RBM39-234ENST00000487604 HEMK1Q9Y5R4 338 aaPredicted RBP4.29□□□□□ -1.72
RBM39-234ENST00000487604 CNTNAP2Q9UHC6 1331 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 IGLV5-39A0A0G2JS06 123 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 SLC22A23A1A5C7 686 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 FAM90A8PA6NJQ4 464 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 VSTM5A8MXK1 200 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 TSPAN6O43657 245 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 FAM90A13PP0C7W8 464 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 FAM90A24PP0C7X0 464 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 PBX1P40424 430 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 ERV3-1Q14264 604 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 GALEQ14376 348 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 KCNJ12Q14500 433 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 GBX1Q14549 363 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 MANEAQ5SRI9 462 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 RBM44Q6ZP01 1051 aaKnown RBP4.28□□□□□ -1.72
RBM39-234ENST00000487604 FAM57BQ71RH2 274 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 PIGKQ92643 395 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 SLC25A32Q9H2D1 315 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 MLXIPQ9HAP2 919 aa4.28□□□□□ -1.72
RBM39-234ENST00000487604 FRMPD2Q68DX3 1309 aaPredicted RBP4.27□□□□□ -1.73
RBM39-234ENST00000487604 A0A087WZ62 844 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 ZNF814B7Z6K7 855 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 CBFA2T3O75081 653 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 S100BP04271 92 aaPredicted RBP4.27□□□□□ -1.73
RBM39-234ENST00000487604 ANXA2P07355 339 aaKnown RBP4.27□□□□□ -1.73
RBM39-234ENST00000487604 RHCEP18577 417 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 RPL17P18621 184 aaKnown RBP4.27□□□□□ -1.73
RBM39-234ENST00000487604 RPS6KB1P23443 525 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 ATICP31939 592 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 RHDQ02161 417 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 MTA1Q13330 715 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 GAB1Q13480 694 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 SEMA5AQ13591 1074 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 SEMA3AQ14563 771 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 CNGA3Q16281 694 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 DAB2IPQ5VWQ8 1189 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 ZNF549Q6P9A3 640 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 KRT28Q7Z3Y7 464 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 SLC25A28Q96A46 364 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 MSI2Q96DH6 328 aaKnown RBP4.27□□□□□ -1.73
RBM39-234ENST00000487604 TMEM8AQ9HCN3 771 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 ABHD10Q9NUJ1 306 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 VPS4AQ9UN37 437 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 PCDHGB6Q9Y5F9 930 aa4.27□□□□□ -1.73
RBM39-234ENST00000487604 PRYO14603 147 aa4.26□□□□□ -1.73
RBM39-234ENST00000487604 TLX3O43711 291 aaPredicted RBP4.26□□□□□ -1.73
RBM39-234ENST00000487604 USP12O75317 370 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms