RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ZIC2O95409 532 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-228ENST00000487354 KLKB1P03952 638 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 MAP3K7CLP57077 242 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 CLDN10P78369 228 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 TRPC3Q13507 836 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 SLC39A14Q15043 492 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 HLA-BQ31612 363 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 ZNF699Q32M78 642 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 FAM26FQ5R3K3 315 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 CNNM4Q6P4Q7 775 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 STXBP4Q6ZWJ1 553 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 NELFCDQ8IXH7 590 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 C12orf56Q8IXR9 622 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 C12orf29Q8N999 325 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 SETD7Q8WTS6 366 aaKnown RBP16.19■□□□□ 0.18
MCF2L-228ENST00000487354 NACA2Q9H009 215 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 TLR8Q9NR97 1041 aaKnown RBP16.19■□□□□ 0.18
MCF2L-228ENST00000487354 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
MCF2L-228ENST00000487354 NUDT5Q9UKK9 219 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 CLEC4EQ9ULY5 219 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 SCML2Q9UQR0 700 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-228ENST00000487354 UBE4BO95155 1302 aa16.19■□□□□ 0.18
MCF2L-228ENST00000487354 CFAP46Q8IYW2 2715 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 A0A1W2PQH9 124 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 LRRIQ3A6PVS8 624 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-228ENST00000487354 BCAT2O15382 392 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-228ENST00000487354 ZBTB24O43167 697 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-228ENST00000487354 STC2O76061 302 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 CER1O95813 267 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 C4BPAP04003 597 aaKnown RBP16.18■□□□□ 0.18
MCF2L-228ENST00000487354 NEFLP07196 543 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 PRKCHP24723 683 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 ATP5C1P36542 298 aaKnown RBP16.18■□□□□ 0.18
MCF2L-228ENST00000487354 MATKP42679 507 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 CUL4AQ13619 759 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 BMT2Q1RMZ1 405 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 KLHDC10Q6PID8 442 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 CLEC20AQ6ZU45 233 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 CRYBG2Q8N1P7 616 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 ADAM32Q8TC27 787 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 PIWIL1Q96J94 861 aaKnown RBP16.18■□□□□ 0.18
MCF2L-228ENST00000487354 TNIP3Q96KP6 325 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 TWNKQ96RR1 684 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 MIR1-1HGQ9H1L0 117 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 FBXO44Q9H4M3 255 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 FAM49BQ9NUQ9 324 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 PCDHGB2Q9Y5G2 931 aa16.18■□□□□ 0.18
MCF2L-228ENST00000487354 NYNRINQ9P2P1 1898 aaKnown RBP16.18■□□□□ 0.18
MCF2L-228ENST00000487354 MYLKQ15746 1914 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 A0A087WV48 116 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 A0A1B0GVT2 93 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 C7P10643 843 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 ASPAP45381 313 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 NDST1P52848 882 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 PTPRNQ16849 979 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 ZNF667Q5HYK9 610 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 TMEM215Q68D42 235 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 SCD5Q86SK9 330 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 TMPRSS6Q8IU80 811 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 PARD3BQ8TEW8 1205 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 EIF2B4Q9UI10 523 aaKnown RBP16.17■□□□□ 0.18
MCF2L-228ENST00000487354 LSM7Q9UK45 103 aaKnown RBP16.17■□□□□ 0.18
MCF2L-228ENST00000487354 PTPRQQ9UMZ3 2332 aa16.17■□□□□ 0.18
MCF2L-228ENST00000487354 FAM149AA5PLN7 773 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 TRABD2BA6NFA1 517 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 FLRT2O43155 660 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 RARGP13631 454 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 CASP1P29466 404 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 SNRPFP62306 86 aaKnown RBP16.16■□□□□ 0.18
MCF2L-228ENST00000487354 ASIC1P78348 528 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 CYP4F3Q08477 520 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 NCOA4Q13772 614 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 ZNF234Q14588 700 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 STARD3Q14849 445 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 CACUL1Q86Y37 369 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 SPRYD3Q8NCJ5 442 aa16.16■□□□□ 0.18
MCF2L-228ENST00000487354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.16■□□□□ 0.18
MCF2L-228ENST00000487354 C1QL1O75973 258 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 SYT1P21579 422 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 ADORA2BP29275 332 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 NASPP49321 788 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-228ENST00000487354 CSNK1EP49674 416 aaKnown RBP16.15■□□□□ 0.18
MCF2L-228ENST00000487354 ZNF132P52740 706 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 DLG4P78352 724 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 BIRC3Q13489 604 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 SMAD1Q15797 465 aaKnown RBP16.15■□□□□ 0.18
MCF2L-228ENST00000487354 KIF19Q2TAC6 998 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 KCNT1Q5JUK3 1230 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 SPOPLQ6IQ16 392 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 IL27RAQ6UWB1 636 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 LAYNQ6UX15 382 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 SORCS1Q8WY21 1168 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 JAKMIP2Q96AA8 810 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 SIPA1Q96FS4 1042 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 C7orf25Q9BPX7 421 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 ORAI3Q9BRQ5 295 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 C6orf106Q9H6K1 298 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-228ENST00000487354 DNMT3LQ9UJW3 386 aa16.15■□□□□ 0.18
MCF2L-228ENST00000487354 SNX11Q9Y5W9 270 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms